Lo CC - Search Results

1

Pathogen comparative genomics in the next-generation sequencing era: genome alignments, pangenomics and metagenomics.

Hu B, Xie G, Lo CC, Starkenburg SR, Chain PS. Hu B, et al. Among authors: lo cc. Brief Funct Genomics. 2011 Nov;10(6):322-33. doi: 10.1093/bfgp/elr042. Brief Funct Genomics. 2011. PMID: 22199376 Review.

2

Cohesion group approach for evolutionary analysis of aspartokinase, an enzyme that feeds a branched network of many biochemical pathways.

Lo CC, Bonner CA, Xie G, D'Souza M, Jensen RA. Lo CC, et al. Microbiol Mol Biol Rev. 2009 Dec;73(4):594-651. doi: 10.1128/MMBR.00024-09. Microbiol Mol Biol Rev. 2009. PMID: 19946135 Free PMC article. Review.

3

Genomics for key players in the N cycle from guinea pigs to the next frontier.

Chain PS, Xie G, Starkenburg SR, Scholz MB, Beckloff N, Lo CC, Davenport KW, Reitenga KG, Daligault HE, Detter JC, Freitas TA, Gleasner CD, Green LD, Han CS, McMurry KK, Meincke LJ, Shen X, Zeytun A. Chain PS, et al. Among authors: lo cc. Methods Enzymol. 2011;496:289-318. doi: 10.1016/B978-0-12-386489-5.00012-9. Methods Enzymol. 2011. PMID: 21514469 Review.

4

Saliva microbiomes distinguish caries-active from healthy human populations.

Yang F, Zeng X, Ning K, Liu KL, Lo CC, Wang W, Chen J, Wang D, Huang R, Chang X, Chain PS, Xie G, Ling J, Xu J. Yang F, et al. Among authors: lo cc. ISME J. 2012 Jan;6(1):1-10. doi: 10.1038/ismej.2011.71. Epub 2011 Jun 30. ISME J. 2012. PMID: 21716312 Free PMC article.

5

Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis.

Scholz MB, Lo CC, Chain PS. Scholz MB, et al. Among authors: lo cc. Curr Opin Biotechnol. 2012 Feb;23(1):9-15. doi: 10.1016/j.copbio.2011.11.013. Epub 2011 Dec 9. Curr Opin Biotechnol. 2012. PMID: 22154470 Review.

6

Capturing single cell genomes of active polysaccharide degraders: an unexpected contribution of Verrucomicrobia.

Martinez-Garcia M, Brazel DM, Swan BK, Arnosti C, Chain PS, Reitenga KG, Xie G, Poulton NJ, Lluesma Gomez M, Masland DE, Thompson B, Bellows WK, Ziervogel K, Lo CC, Ahmed S, Gleasner CD, Detter CJ, Stepanauskas R. Martinez-Garcia M, et al. Among authors: lo cc. PLoS One. 2012;7(4):e35314. doi: 10.1371/journal.pone.0035314. Epub 2012 Apr 20. PLoS One. 2012. PMID: 22536372 Free PMC article.

7

A programmable droplet-based microfluidic device applied to multiparameter analysis of single microbes and microbial communities.

Leung K, Zahn H, Leaver T, Konwar KM, Hanson NW, Pagé AP, Lo CC, Chain PS, Hallam SJ, Hansen CL. Leung K, et al. Among authors: lo cc. Proc Natl Acad Sci U S A. 2012 May 15;109(20):7665-70. doi: 10.1073/pnas.1106752109. Epub 2012 Apr 30. Proc Natl Acad Sci U S A. 2012. PMID: 22547789 Free PMC article.

8

Genome sequence of Kingella kingae septic arthritis isolate PYKK081.

Kaplan JB, Lo C, Xie G, Johnson SL, Chain PS, Donnelly R, Kachlany SC, Balashova NV. Kaplan JB, et al. J Bacteriol. 2012 Jun;194(11):3017. doi: 10.1128/JB.00421-12. J Bacteriol. 2012. PMID: 22582375 Free PMC article.

9

Artificial polyploidy improves bacterial single cell genome recovery.

Dichosa AE, Fitzsimons MS, Lo CC, Weston LL, Preteska LG, Snook JP, Zhang X, Gu W, McMurry K, Green LD, Chain PS, Detter JC, Han CS. Dichosa AE, et al. Among authors: lo cc. PLoS One. 2012;7(5):e37387. doi: 10.1371/journal.pone.0037387. Epub 2012 May 22. PLoS One. 2012. PMID: 22666352 Free PMC article.

10

The alternative translational profile that underlies the immune-evasive state of persistence in Chlamydiaceae exploits differential tryptophan contents of the protein repertoire.

Lo CC, Xie G, Bonner CA, Jensen RA. Lo CC, et al. Microbiol Mol Biol Rev. 2012 Jun;76(2):405-43. doi: 10.1128/MMBR.05013-11. Microbiol Mol Biol Rev. 2012. PMID: 22688818 Free PMC article. Review.

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