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Genome-wide assessment of AU-rich elements by the AREScore algorithm.
Spasic M, Friedel CC, Schott J, Kreth J, Leppek K, Hofmann S, Ozgur S, Stoecklin G. Spasic M, et al. Among authors: friedel cc. PLoS Genet. 2012 Jan;8(1):e1002433. doi: 10.1371/journal.pgen.1002433. Epub 2012 Jan 5. PLoS Genet. 2012. PMID: 22242014 Free PMC article.
RC3H1 post-transcriptionally regulates A20 mRNA and modulates the activity of the IKK/NF-κB pathway.
Murakawa Y, Hinz M, Mothes J, Schuetz A, Uhl M, Wyler E, Yasuda T, Mastrobuoni G, Friedel CC, Dölken L, Kempa S, Schmidt-Supprian M, Blüthgen N, Backofen R, Heinemann U, Wolf J, Scheidereit C, Landthaler M. Murakawa Y, et al. Among authors: friedel cc. Nat Commun. 2015 Jul 14;6:7367. doi: 10.1038/ncomms8367. Nat Commun. 2015. PMID: 26170170 Free PMC article.
Prediction of Poly(A) Sites by Poly(A) Read Mapping.
Bonfert T, Friedel CC. Bonfert T, et al. Among authors: friedel cc. PLoS One. 2017 Jan 30;12(1):e0170914. doi: 10.1371/journal.pone.0170914. eCollection 2017. PLoS One. 2017. PMID: 28135292 Free PMC article.
Immune homeostasis and regulation of the interferon pathway require myeloid-derived Regnase-3.
von Gamm M, Schaub A, Jones AN, Wolf C, Behrens G, Lichti J, Essig K, Macht A, Pircher J, Ehrlich A, Davari K, Chauhan D, Busch B, Wurst W, Feederle R, Feuchtinger A, Tschöp MH, Friedel CC, Hauck SM, Sattler M, Geerlof A, Hornung V, Heissmeyer V, Schulz C, Heikenwalder M, Glasmacher E. von Gamm M, et al. Among authors: friedel cc. J Exp Med. 2019 Jul 1;216(7):1700-1723. doi: 10.1084/jem.20181762. Epub 2019 May 24. J Exp Med. 2019. PMID: 31126966 Free PMC article.
MIR sequences recruit zinc finger protein ZNF768 to expressed genes.
Rohrmoser M, Kluge M, Yahia Y, Gruber-Eber A, Maqbool MA, Forné I, Krebs S, Blum H, Greifenberg AK, Geyer M, Descostes N, Imhof A, Andrau JC, Friedel CC, Eick D. Rohrmoser M, et al. Among authors: friedel cc. Nucleic Acids Res. 2019 Jan 25;47(2):700-715. doi: 10.1093/nar/gky1148. Nucleic Acids Res. 2019. PMID: 30476274 Free PMC article.
Mining RNA-seq data for infections and contaminations.
Bonfert T, Csaba G, Zimmer R, Friedel CC. Bonfert T, et al. Among authors: friedel cc. PLoS One. 2013 Sep 3;8(9):e73071. doi: 10.1371/journal.pone.0073071. eCollection 2013. PLoS One. 2013. PMID: 24019895 Free PMC article.
ContextMap 2: fast and accurate context-based RNA-seq mapping.
Bonfert T, Kirner E, Csaba G, Zimmer R, Friedel CC. Bonfert T, et al. Among authors: friedel cc. BMC Bioinformatics. 2015 Apr 17;16:122. doi: 10.1186/s12859-015-0557-5. BMC Bioinformatics. 2015. PMID: 25928589 Free PMC article.
82 results