Wei CL - Search Results

1

Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation.

Li G, Ruan X, Auerbach RK, Sandhu KS, Zheng M, Wang P, Poh HM, Goh Y, Lim J, Zhang J, Sim HS, Peh SQ, Mulawadi FH, Ong CT, Orlov YL, Hong S, Zhang Z, Landt S, Raha D, Euskirchen G, Wei CL, Ge W, Wang H, Davis C, Fisher-Aylor KI, Mortazavi A, Gerstein M, Gingeras T, Wold B, Sun Y, Fullwood MJ, Cheung E, Liu E, Sung WK, Snyder M, Ruan Y. Li G, et al. Among authors: wei cl. Cell. 2012 Jan 20;148(1-2):84-98. doi: 10.1016/j.cell.2011.12.014. Cell. 2012. PMID: 22265404 Free PMC article.

2

5' Long serial analysis of gene expression (LongSAGE) and 3' LongSAGE for transcriptome characterization and genome annotation.

Wei CL, Ng P, Chiu KP, Wong CH, Ang CC, Lipovich L, Liu ET, Ruan Y. Wei CL, et al. Proc Natl Acad Sci U S A. 2004 Aug 10;101(32):11701-6. doi: 10.1073/pnas.0403514101. Epub 2004 Jul 22. Proc Natl Acad Sci U S A. 2004. PMID: 15272081 Free PMC article.

3

Mutational dynamics of the SARS coronavirus in cell culture and human populations isolated in 2003.

Vega VB, Ruan Y, Liu J, Lee WH, Wei CL, Se-Thoe SY, Tang KF, Zhang T, Kolatkar PR, Ooi EE, Ling AE, Stanton LW, Long PM, Liu ET. Vega VB, et al. Among authors: wei cl. BMC Infect Dis. 2004 Sep 6;4:32. doi: 10.1186/1471-2334-4-32. BMC Infect Dis. 2004. PMID: 15347429 Free PMC article.

4

Transcriptome profiling of human and murine ESCs identifies divergent paths required to maintain the stem cell state.

Wei CL, Miura T, Robson P, Lim SK, Xu XQ, Lee MY, Gupta S, Stanton L, Luo Y, Schmitt J, Thies S, Wang W, Khrebtukova I, Zhou D, Liu ET, Ruan YJ, Rao M, Lim B. Wei CL, et al. Stem Cells. 2005 Feb;23(2):166-85. doi: 10.1634/stemcells.2004-0162. Stem Cells. 2005. PMID: 15671141

5

Gene identification signature (GIS) analysis for transcriptome characterization and genome annotation.

Ng P, Wei CL, Sung WK, Chiu KP, Lipovich L, Ang CC, Gupta S, Shahab A, Ridwan A, Wong CH, Liu ET, Ruan Y. Ng P, et al. Among authors: wei cl. Nat Methods. 2005 Feb;2(2):105-11. doi: 10.1038/nmeth733. Epub 2005 Jan 9. Nat Methods. 2005. PMID: 15782207

6

RNA viral community in human feces: prevalence of plant pathogenic viruses.

Zhang T, Breitbart M, Lee WH, Run JQ, Wei CL, Soh SW, Hibberd ML, Liu ET, Rohwer F, Ruan Y. Zhang T, et al. Among authors: wei cl. PLoS Biol. 2006 Jan;4(1):e3. doi: 10.1371/journal.pbio.0040003. PLoS Biol. 2006. PMID: 16336043 Free PMC article.

7

A global map of p53 transcription-factor binding sites in the human genome.

Wei CL, Wu Q, Vega VB, Chiu KP, Ng P, Zhang T, Shahab A, Yong HC, Fu Y, Weng Z, Liu J, Zhao XD, Chew JL, Lee YL, Kuznetsov VA, Sung WK, Miller LD, Lim B, Liu ET, Yu Q, Ng HH, Ruan Y. Wei CL, et al. Cell. 2006 Jan 13;124(1):207-19. doi: 10.1016/j.cell.2005.10.043. Cell. 2006. PMID: 16413492 Free article.

8

The Oct4 and Nanog transcription network regulates pluripotency in mouse embryonic stem cells.

Loh YH, Wu Q, Chew JL, Vega VB, Zhang W, Chen X, Bourque G, George J, Leong B, Liu J, Wong KY, Sung KW, Lee CW, Zhao XD, Chiu KP, Lipovich L, Kuznetsov VA, Robson P, Stanton LW, Wei CL, Ruan Y, Lim B, Ng HH. Loh YH, et al. Among authors: wei cl. Nat Genet. 2006 Apr;38(4):431-40. doi: 10.1038/ng1760. Epub 2006 Mar 5. Nat Genet. 2006. PMID: 16518401

9

Multiplex sequencing of paired-end ditags (MS-PET): a strategy for the ultra-high-throughput analysis of transcriptomes and genomes.

Ng P, Tan JJ, Ooi HS, Lee YL, Chiu KP, Fullwood MJ, Srinivasan KG, Perbost C, Du L, Sung WK, Wei CL, Ruan Y. Ng P, et al. Among authors: wei cl. Nucleic Acids Res. 2006 Jul 13;34(12):e84. doi: 10.1093/nar/gkl444. Nucleic Acids Res. 2006. PMID: 16840528 Free PMC article.

10

PET-Tool: a software suite for comprehensive processing and managing of Paired-End diTag (PET) sequence data.

Chiu KP, Wong CH, Chen Q, Ariyaratne P, Ooi HS, Wei CL, Sung WK, Ruan Y. Chiu KP, et al. Among authors: wei cl. BMC Bioinformatics. 2006 Aug 25;7:390. doi: 10.1186/1471-2105-7-390. BMC Bioinformatics. 2006. PMID: 16934139 Free PMC article.

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