Heinken A - Search Results

1

A systems biology approach to drug targets in Pseudomonas aeruginosa biofilm.

Sigurdsson G, Fleming RM, Heinken A, Thiele I. Sigurdsson G, et al. Among authors: heinken a. PLoS One. 2012;7(4):e34337. doi: 10.1371/journal.pone.0034337. Epub 2012 Apr 16. PLoS One. 2012. PMID: 22523548 Free PMC article.

2

Systems-level characterization of a host-microbe metabolic symbiosis in the mammalian gut.

Heinken A, Sahoo S, Fleming RM, Thiele I. Heinken A, et al. Gut Microbes. 2013 Jan-Feb;4(1):28-40. doi: 10.4161/gmic.22370. Epub 2012 Sep 28. Gut Microbes. 2013. PMID: 23022739 Free PMC article.

3

A systems biology approach to studying the role of microbes in human health.

Thiele I, Heinken A, Fleming RM. Thiele I, et al. Among authors: heinken a. Curr Opin Biotechnol. 2013 Feb;24(1):4-12. doi: 10.1016/j.copbio.2012.10.001. Epub 2012 Oct 25. Curr Opin Biotechnol. 2013. PMID: 23102866 Free article. Review.

4

Functional metabolic map of Faecalibacterium prausnitzii, a beneficial human gut microbe.

Heinken A, Khan MT, Paglia G, Rodionov DA, Harmsen HJ, Thiele I. Heinken A, et al. J Bacteriol. 2014 Sep;196(18):3289-302. doi: 10.1128/JB.01780-14. Epub 2014 Jul 7. J Bacteriol. 2014. PMID: 25002542 Free PMC article.

5

Anoxic Conditions Promote Species-Specific Mutualism between Gut Microbes In Silico.

Heinken A, Thiele I. Heinken A, et al. Appl Environ Microbiol. 2015 Jun 15;81(12):4049-61. doi: 10.1128/AEM.00101-15. Epub 2015 Apr 3. Appl Environ Microbiol. 2015. PMID: 25841013 Free PMC article.

6

Systematic prediction of health-relevant human-microbial co-metabolism through a computational framework.

Heinken A, Thiele I. Heinken A, et al. Gut Microbes. 2015;6(2):120-30. doi: 10.1080/19490976.2015.1023494. Gut Microbes. 2015. PMID: 25901891 Free PMC article.

7

Systems biology of host-microbe metabolomics.

Heinken A, Thiele I. Heinken A, et al. Wiley Interdiscip Rev Syst Biol Med. 2015 Jul-Aug;7(4):195-219. doi: 10.1002/wsbm.1301. Epub 2015 Apr 30. Wiley Interdiscip Rev Syst Biol Med. 2015. PMID: 25929487 Free PMC article. Review.

8

Generation of genome-scale metabolic reconstructions for 773 members of the human gut microbiota.

Magnúsdóttir S, Heinken A, Kutt L, Ravcheev DA, Bauer E, Noronha A, Greenhalgh K, Jäger C, Baginska J, Wilmes P, Fleming RM, Thiele I. Magnúsdóttir S, et al. Among authors: heinken a. Nat Biotechnol. 2017 Jan;35(1):81-89. doi: 10.1038/nbt.3703. Epub 2016 Nov 28. Nat Biotechnol. 2017. PMID: 27893703

9

Gut microbiota functions: metabolism of nutrients and other food components.

Rowland I, Gibson G, Heinken A, Scott K, Swann J, Thiele I, Tuohy K. Rowland I, et al. Among authors: heinken a. Eur J Nutr. 2018 Feb;57(1):1-24. doi: 10.1007/s00394-017-1445-8. Epub 2017 Apr 9. Eur J Nutr. 2018. PMID: 28393285 Free PMC article. Review.

10

Recon3D enables a three-dimensional view of gene variation in human metabolism.

Brunk E, Sahoo S, Zielinski DC, Altunkaya A, Dräger A, Mih N, Gatto F, Nilsson A, Preciat Gonzalez GA, Aurich MK, Prlić A, Sastry A, Danielsdottir AD, Heinken A, Noronha A, Rose PW, Burley SK, Fleming RMT, Nielsen J, Thiele I, Palsson BO. Brunk E, et al. Among authors: heinken a. Nat Biotechnol. 2018 Mar;36(3):272-281. doi: 10.1038/nbt.4072. Epub 2018 Feb 19. Nat Biotechnol. 2018. PMID: 29457794 Free PMC article.

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