Spiro A - Search Results

1

Cell lineage analysis of acute leukemia relapse uncovers the role of replication-rate heterogeneity and microsatellite instability.

Shlush LI, Chapal-Ilani N, Adar R, Pery N, Maruvka Y, Spiro A, Shouval R, Rowe JM, Tzukerman M, Bercovich D, Izraeli S, Marcucci G, Bloomfield CD, Zuckerman T, Skorecki K, Shapiro E. Shlush LI, et al. Among authors: spiro a. Blood. 2012 Jul 19;120(3):603-12. doi: 10.1182/blood-2011-10-388629. Epub 2012 May 29. Blood. 2012. PMID: 22645183 Free article.

2

Comparing algorithms that reconstruct cell lineage trees utilizing information on microsatellite mutations.

Chapal-Ilani N, Maruvka YE, Spiro A, Reizel Y, Adar R, Shlush LI, Shapiro E. Chapal-Ilani N, et al. Among authors: spiro a. PLoS Comput Biol. 2013;9(11):e1003297. doi: 10.1371/journal.pcbi.1003297. Epub 2013 Nov 14. PLoS Comput Biol. 2013. PMID: 24244121 Free PMC article.

3

Accuracy of Answers to Cell Lineage Questions Depends on Single-Cell Genomics Data Quality and Quantity.

Spiro A, Shapiro E. Spiro A, et al. PLoS Comput Biol. 2016 Jun 13;12(6):e1004983. doi: 10.1371/journal.pcbi.1004983. eCollection 2016 Jun. PLoS Comput Biol. 2016. PMID: 27295404 Free PMC article.

4

A generic, cost-effective, and scalable cell lineage analysis platform.

Biezuner T, Spiro A, Raz O, Amir S, Milo L, Adar R, Chapal-Ilani N, Berman V, Fried Y, Ainbinder E, Cohen G, Barr HM, Halaban R, Shapiro E. Biezuner T, et al. Among authors: spiro a. Genome Res. 2016 Nov;26(11):1588-1599. doi: 10.1101/gr.202903.115. Epub 2016 Aug 24. Genome Res. 2016. PMID: 27558250 Free PMC article.

5

eSTGt: a programming and simulation environment for population dynamics.

Spiro A, Shapiro E. Spiro A, et al. BMC Bioinformatics. 2016 Apr 27;17(1):187. doi: 10.1186/s12859-016-1004-y. BMC Bioinformatics. 2016. PMID: 27117841 Free PMC article.

6

Erratum to: eSTGt: a programming and simulation environment for population dynamics.

Spiro A, Shapiro E. Spiro A, et al. BMC Bioinformatics. 2016 Aug 10;17:303. doi: 10.1186/s12859-016-1155-x. BMC Bioinformatics. 2016. PMID: 27510770 Free PMC article. No abstract available.

7

Lineage grammars: describing, simulating and analyzing population dynamics.

Spiro A, Cardelli L, Shapiro E. Spiro A, et al. BMC Bioinformatics. 2014 Jul 21;15(1):249. doi: 10.1186/1471-2105-15-249. BMC Bioinformatics. 2014. PMID: 25047682 Free PMC article.

8

Short tandem repeat stutter model inferred from direct measurement of in vitro stutter noise.

Raz O, Biezuner T, Spiro A, Amir S, Milo L, Titelman A, Onn A, Chapal-Ilani N, Tao L, Marx T, Feige U, Shapiro E. Raz O, et al. Among authors: spiro a. Nucleic Acids Res. 2019 Mar 18;47(5):2436-2445. doi: 10.1093/nar/gky1318. Nucleic Acids Res. 2019. PMID: 30698816 Free PMC article.

9

Gender-specific postnatal demethylation and establishment of epigenetic memory.

Reizel Y, Spiro A, Sabag O, Skversky Y, Hecht M, Keshet I, Berman BP, Cedar H. Reizel Y, et al. Among authors: spiro a. Genes Dev. 2015 May 1;29(9):923-33. doi: 10.1101/gad.259309.115. Genes Dev. 2015. PMID: 25934504 Free PMC article.

10

Tissue-specific DNA demethylation is required for proper B-cell differentiation and function.

Orlanski S, Labi V, Reizel Y, Spiro A, Lichtenstein M, Levin-Klein R, Koralov SB, Skversky Y, Rajewsky K, Cedar H, Bergman Y. Orlanski S, et al. Among authors: spiro a. Proc Natl Acad Sci U S A. 2016 May 3;113(18):5018-23. doi: 10.1073/pnas.1604365113. Epub 2016 Apr 18. Proc Natl Acad Sci U S A. 2016. PMID: 27091986 Free PMC article.

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