Lin S - Search Results

1

DNA methylation alterations in response to pesticide exposure in vitro.

Zhang X, Wallace AD, Du P, Kibbe WA, Jafari N, Xie H, Lin S, Baccarelli A, Soares MB, Hou L. Zhang X, et al. Among authors: lin s. Environ Mol Mutagen. 2012 Aug;53(7):542-9. doi: 10.1002/em.21718. Epub 2012 Jul 30. Environ Mol Mutagen. 2012. PMID: 22847954 Free PMC article.

2

Genome-wide study of DNA methylation alterations in response to diazinon exposure in vitro.

Zhang X, Wallace AD, Du P, Lin S, Baccarelli AA, Jiang H, Jafari N, Zheng Y, Xie H, Soares MB, Kibbe WA, Hou L. Zhang X, et al. Among authors: lin s. Environ Toxicol Pharmacol. 2012 Nov;34(3):959-68. doi: 10.1016/j.etap.2012.07.012. Epub 2012 Aug 1. Environ Toxicol Pharmacol. 2012. PMID: 22964155 Free PMC article.

3

Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis.

Du P, Zhang X, Huang CC, Jafari N, Kibbe WA, Hou L, Lin SM. Du P, et al. BMC Bioinformatics. 2010 Nov 30;11:587. doi: 10.1186/1471-2105-11-587. BMC Bioinformatics. 2010. PMID: 21118553 Free PMC article.

4

From disease ontology to disease-ontology lite: statistical methods to adapt a general-purpose ontology for the test of gene-ontology associations.

Du P, Feng G, Flatow J, Song J, Holko M, Kibbe WA, Lin SM. Du P, et al. Bioinformatics. 2009 Jun 15;25(12):i63-8. doi: 10.1093/bioinformatics/btp193. Bioinformatics. 2009. PMID: 19478018 Free PMC article.

5

Mining biomedical data using MetaMap Transfer (MMtx) and the Unified Medical Language System (UMLS).

Osborne JD, Lin S, Zhu L, Kibbe WA. Osborne JD, et al. Among authors: lin s. Methods Mol Biol. 2007;408:153-69. doi: 10.1007/978-1-59745-547-3_9. Methods Mol Biol. 2007. PMID: 18314582

6

Using Free and Open-Source Bioconductor Packages to Analyze Array Comparative Genomics Hybridization (aCGH) Data.

Lin S, Du P, Jafari N, Ouchi T. Lin S, et al. Curr Genomics. 2009 Mar;10(1):60-3. doi: 10.2174/138920209787581244. Curr Genomics. 2009. PMID: 19721812 Free PMC article.

7

lumi: a pipeline for processing Illumina microarray.

Du P, Kibbe WA, Lin SM. Du P, et al. Bioinformatics. 2008 Jul 1;24(13):1547-8. doi: 10.1093/bioinformatics/btn224. Epub 2008 May 8. Bioinformatics. 2008. PMID: 18467348

8

Visual presentation as a welcome alternative to textual presentation of gene annotation information.

Desai J, Flatow JM, Song J, Zhu LJ, Du P, Huang CC, Lu H, Lin SM, Kibbe WA. Desai J, et al. Adv Exp Med Biol. 2010;680:709-15. doi: 10.1007/978-1-4419-5913-3_79. Adv Exp Med Biol. 2010. PMID: 20865558 Free PMC article.

9

Using the bioconductor GeneAnswers package to interpret gene lists.

Feng G, Shaw P, Rosen ST, Lin SM, Kibbe WA. Feng G, et al. Methods Mol Biol. 2012;802:101-12. doi: 10.1007/978-1-61779-400-1_7. Methods Mol Biol. 2012. PMID: 22130876

10

Genome-wide DNA methylation indicates silencing of tumor suppressor genes in uterine leiomyoma.

Navarro A, Yin P, Monsivais D, Lin SM, Du P, Wei JJ, Bulun SE. Navarro A, et al. PLoS One. 2012;7(3):e33284. doi: 10.1371/journal.pone.0033284. Epub 2012 Mar 13. PLoS One. 2012. PMID: 22428009 Free PMC article.

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