Zhu J - Search Results

1

Integrating external biological knowledge in the construction of regulatory networks from time-series expression data.

Lo K, Raftery AE, Dombek KM, Zhu J, Schadt EE, Bumgarner RE, Yeung KY. Lo K, et al. Among authors: zhu j. BMC Syst Biol. 2012 Aug 16;6:101. doi: 10.1186/1752-0509-6-101. BMC Syst Biol. 2012. PMID: 22898396 Free PMC article.

2

Temporal genetic association and temporal genetic causality methods for dissecting complex networks.

Lin L, Chen Q, Hirsch JP, Yoo S, Yeung K, Bumgarner RE, Tu Z, Schadt EE, Zhu J. Lin L, et al. Among authors: zhu j. Nat Commun. 2018 Sep 28;9(1):3980. doi: 10.1038/s41467-018-06203-3. Nat Commun. 2018. PMID: 30266904 Free PMC article.

3

Integrating large-scale functional genomic data to dissect the complexity of yeast regulatory networks.

Zhu J, Zhang B, Smith EN, Drees B, Brem RB, Kruglyak L, Bumgarner RE, Schadt EE. Zhu J, et al. Nat Genet. 2008 Jul;40(7):854-61. doi: 10.1038/ng.167. Epub 2008 Jun 15. Nat Genet. 2008. PMID: 18552845 Free PMC article.

4

Inferring causal genomic alterations in breast cancer using gene expression data.

Tran LM, Zhang B, Zhang Z, Zhang C, Xie T, Lamb JR, Dai H, Schadt EE, Zhu J. Tran LM, et al. Among authors: zhu j. BMC Syst Biol. 2011 Aug 1;5:121. doi: 10.1186/1752-0509-5-121. BMC Syst Biol. 2011. PMID: 21806811 Free PMC article.

5

Construction of regulatory networks using expression time-series data of a genotyped population.

Yeung KY, Dombek KM, Lo K, Mittler JE, Zhu J, Schadt EE, Bumgarner RE, Raftery AE. Yeung KY, et al. Among authors: zhu j. Proc Natl Acad Sci U S A. 2011 Nov 29;108(48):19436-41. doi: 10.1073/pnas.1116442108. Epub 2011 Nov 14. Proc Natl Acad Sci U S A. 2011. PMID: 22084118 Free PMC article.

6

Stitching together multiple data dimensions reveals interacting metabolomic and transcriptomic networks that modulate cell regulation.

Zhu J, Sova P, Xu Q, Dombek KM, Xu EY, Vu H, Tu Z, Brem RB, Bumgarner RE, Schadt EE. Zhu J, et al. PLoS Biol. 2012;10(4):e1001301. doi: 10.1371/journal.pbio.1001301. Epub 2012 Apr 3. PLoS Biol. 2012. PMID: 22509135 Free PMC article.

7

A systems biology approach to drug discovery.

Zhu J, Zhang B, Schadt EE. Zhu J, et al. Adv Genet. 2008;60:603-35. doi: 10.1016/S0065-2660(07)00421-X. Adv Genet. 2008. PMID: 18358334 Review.

8

Advances in systems biology are enhancing our understanding of disease and moving us closer to novel disease treatments.

Schadt EE, Zhang B, Zhu J. Schadt EE, et al. Among authors: zhu j. Genetica. 2009 Jun;136(2):259-69. doi: 10.1007/s10709-009-9359-x. Epub 2009 Apr 11. Genetica. 2009. PMID: 19363597 Review.

9

Disentangling molecular relationships with a causal inference test.

Millstein J, Zhang B, Zhu J, Schadt EE. Millstein J, et al. Among authors: zhu j. BMC Genet. 2009 May 27;10:23. doi: 10.1186/1471-2156-10-23. BMC Genet. 2009. PMID: 19473544 Free PMC article.

10

Meta-analysis of inter-species liver co-expression networks elucidates traits associated with common human diseases.

Wang K, Narayanan M, Zhong H, Tompa M, Schadt EE, Zhu J. Wang K, et al. Among authors: zhu j. PLoS Comput Biol. 2009 Dec;5(12):e1000616. doi: 10.1371/journal.pcbi.1000616. Epub 2009 Dec 18. PLoS Comput Biol. 2009. PMID: 20019805 Free PMC article.

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