Abe T - Search Results

1

A novel approach, based on BLSOMs (Batch Learning Self-Organizing Maps), to the microbiome analysis of ticks.

Nakao R, Abe T, Nijhof AM, Yamamoto S, Jongejan F, Ikemura T, Sugimoto C. Nakao R, et al. Among authors: abe t. ISME J. 2013 May;7(5):1003-15. doi: 10.1038/ismej.2012.171. Epub 2013 Jan 10. ISME J. 2013. PMID: 23303373 Free PMC article.

2

Analysis of codon usage diversity of bacterial genes with a self-organizing map (SOM): characterization of horizontally transferred genes with emphasis on the E. coli O157 genome.

Kanaya S, Kinouchi M, Abe T, Kudo Y, Yamada Y, Nishi T, Mori H, Ikemura T. Kanaya S, et al. Among authors: abe t. Gene. 2001 Oct 3;276(1-2):89-99. doi: 10.1016/s0378-1119(01)00673-4. Gene. 2001. PMID: 11591475

3

Informatics for unveiling hidden genome signatures.

Abe T, Kanaya S, Kinouchi M, Ichiba Y, Kozuki T, Ikemura T. Abe T, et al. Genome Res. 2003 Apr;13(4):693-702. doi: 10.1101/gr.634603. Genome Res. 2003. PMID: 12671005 Free PMC article.

4

Dinucleosome DNA of human K562 cells: experimental and computational characterizations.

Kato M, Onishi Y, Wada-Kiyama Y, Abe T, Ikemura T, Kogan S, Bolshoy A, Trifonov EN, Kiyama R. Kato M, et al. Among authors: abe t. J Mol Biol. 2003 Sep 5;332(1):111-25. doi: 10.1016/s0022-2836(03)00838-6. J Mol Biol. 2003. PMID: 12946351

5

A novel bioinformatic strategy for unveiling hidden genome signatures of eukaryotes: self-organizing map of oligonucleotide frequency.

Abe T, Kanaya S, Kinouchi M, Ichiba Y, Kozuki T, Ikemura T. Abe T, et al. Genome Inform. 2002;13:12-20. Genome Inform. 2002. PMID: 14571370

6

Substrate-induced gene-expression screening of environmental metagenome libraries for isolation of catabolic genes.

Uchiyama T, Abe T, Ikemura T, Watanabe K. Uchiyama T, et al. Among authors: abe t. Nat Biotechnol. 2005 Jan;23(1):88-93. doi: 10.1038/nbt1048. Epub 2004 Dec 19. Nat Biotechnol. 2005. PMID: 15608629

7

Direct cloning of genes encoding novel xylanases from the human gut.

Hayashi H, Abe T, Sakamoto M, Ohara H, Ikemura T, Sakka K, Benno Y. Hayashi H, et al. Among authors: abe t. Can J Microbiol. 2005 Mar;51(3):251-9. doi: 10.1139/w04-136. Can J Microbiol. 2005. PMID: 15920623

8

Self-Organizing Map (SOM) unveils and visualizes hidden sequence characteristics of a wide range of eukaryote genomes.

Abe T, Sugawara H, Kanaya S, Kinouchi M, Ikemura T. Abe T, et al. Gene. 2006 Jan 3;365:27-34. doi: 10.1016/j.gene.2005.09.040. Epub 2005 Dec 20. Gene. 2006. PMID: 16364569

9

Novel phylogenetic studies of genomic sequence fragments derived from uncultured microbe mixtures in environmental and clinical samples.

Abe T, Sugawara H, Kinouchi M, Kanaya S, Ikemura T. Abe T, et al. DNA Res. 2005;12(5):281-90. doi: 10.1093/dnares/dsi015. Epub 2006 Jan 10. DNA Res. 2005. PMID: 16769690 Free article.

10

tRNADB-CE: tRNA gene database curated manually by experts.

Abe T, Ikemura T, Ohara Y, Uehara H, Kinouchi M, Kanaya S, Yamada Y, Muto A, Inokuchi H. Abe T, et al. Nucleic Acids Res. 2009 Jan;37(Database issue):D163-8. doi: 10.1093/nar/gkn692. Epub 2008 Oct 8. Nucleic Acids Res. 2009. PMID: 18842632 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

9,121 results

Search Page

Filters