Mohammed J - Search Results

1

Inference of natural selection from interspersed genomic elements based on polymorphism and divergence.

Gronau I, Arbiza L, Mohammed J, Siepel A. Gronau I, et al. Among authors: mohammed j. Mol Biol Evol. 2013 May;30(5):1159-71. doi: 10.1093/molbev/mst019. Epub 2013 Feb 5. Mol Biol Evol. 2013. PMID: 23386628 Free PMC article.

2

The impact of age, biogenesis, and genomic clustering on Drosophila microRNA evolution.

Mohammed J, Flynt AS, Siepel A, Lai EC. Mohammed J, et al. RNA. 2013 Sep;19(9):1295-308. doi: 10.1261/rna.039248.113. Epub 2013 Jul 23. RNA. 2013. PMID: 23882112 Free PMC article.

3

Adaptive evolution of testis-specific, recently evolved, clustered miRNAs in Drosophila.

Mohammed J, Bortolamiol-Becet D, Flynt AS, Gronau I, Siepel A, Lai EC. Mohammed J, et al. RNA. 2014 Aug;20(8):1195-209. doi: 10.1261/rna.044644.114. Epub 2014 Jun 18. RNA. 2014. PMID: 24942624 Free PMC article.

4

Diverse modes of evolutionary emergence and flux of conserved microRNA clusters.

Mohammed J, Siepel A, Lai EC. Mohammed J, et al. RNA. 2014 Dec;20(12):1850-63. doi: 10.1261/rna.046805.114. Epub 2014 Oct 20. RNA. 2014. PMID: 25332374 Free PMC article.

5

Deep experimental profiling of microRNA diversity, deployment, and evolution across the Drosophila genus.

Mohammed J, Flynt AS, Panzarino AM, Mondal MMH, DeCruz M, Siepel A, Lai EC. Mohammed J, et al. Genome Res. 2018 Jan;28(1):52-65. doi: 10.1101/gr.226068.117. Epub 2017 Dec 12. Genome Res. 2018. PMID: 29233922 Free PMC article.

6

Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines.

Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC. Wen J, et al. Among authors: mohammed j. Genome Res. 2014 Jul;24(7):1236-50. doi: 10.1101/gr.161554.113. Genome Res. 2014. PMID: 24985917 Free PMC article.

7

New genes often acquire male-specific functions but rarely become essential in Drosophila.

Kondo S, Vedanayagam J, Mohammed J, Eizadshenass S, Kan L, Pang N, Aradhya R, Siepel A, Steinhauer J, Lai EC. Kondo S, et al. Among authors: mohammed j. Genes Dev. 2017 Sep 15;31(18):1841-1846. doi: 10.1101/gad.303131.117. Genes Dev. 2017. PMID: 29051389 Free PMC article.

8

Erratum: Deep experimental profiling of microRNA diversity, deployment, and evolution across the Drosophila genus.

Mohammed J, Flynt AS, Panzarino AM, Mondal MMH, DeCruz M, Siepel A, Lai EC. Mohammed J, et al. Genome Res. 2019 May;29(5):881. doi: 10.1101/gr.250654.119. Genome Res. 2019. PMID: 31043510 Free PMC article. No abstract available.

9

Global diversity lines - a five-continent reference panel of sequenced Drosophila melanogaster strains.

Grenier JK, Arguello JR, Moreira MC, Gottipati S, Mohammed J, Hackett SR, Boughton R, Greenberg AJ, Clark AG. Grenier JK, et al. Among authors: mohammed j. G3 (Bethesda). 2015 Feb 11;5(4):593-603. doi: 10.1534/g3.114.015883. G3 (Bethesda). 2015. PMID: 25673134 Free PMC article.

10

A deeply conserved, noncanonical miRNA hosted by ribosomal DNA.

Chak LL, Mohammed J, Lai EC, Tucker-Kellogg G, Okamura K. Chak LL, et al. Among authors: mohammed j. RNA. 2015 Mar;21(3):375-84. doi: 10.1261/rna.049098.114. Epub 2015 Jan 20. RNA. 2015. PMID: 25605965 Free PMC article.

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