Zhang Z - Search Results

1

Community intelligence in knowledge curation: an application to managing scientific nomenclature.

Dai L, Xu C, Tian M, Sang J, Zou D, Li A, Liu G, Chen F, Wu J, Xiao J, Wang X, Yu J, Zhang Z. Dai L, et al. Among authors: zhang z. PLoS One. 2013;8(2):e56961. doi: 10.1371/journal.pone.0056961. Epub 2013 Feb 25. PLoS One. 2013. PMID: 23451119 Free PMC article.

2

KaKs_Calculator: calculating Ka and Ks through model selection and model averaging.

Zhang Z, Li J, Zhao XQ, Wang J, Wong GK, Yu J. Zhang Z, et al. Genomics Proteomics Bioinformatics. 2006 Nov;4(4):259-63. doi: 10.1016/S1672-0229(07)60007-2. Genomics Proteomics Bioinformatics. 2006. PMID: 17531802 Free PMC article.

3

Correlation between Ka/Ks and Ks is related to substitution model and evolutionary lineage.

Li J, Zhang Z, Vang S, Yu J, Wong GK, Wang J. Li J, et al. Among authors: zhang z. J Mol Evol. 2009 Apr;68(4):414-23. doi: 10.1007/s00239-009-9222-9. Epub 2009 Mar 24. J Mol Evol. 2009. PMID: 19308632

4

KaKs_Calculator 2.0: a toolkit incorporating gamma-series methods and sliding window strategies.

Wang D, Zhang Y, Zhang Z, Zhu J, Yu J. Wang D, et al. Among authors: zhang z, zhang y. Genomics Proteomics Bioinformatics. 2010 Mar;8(1):77-80. doi: 10.1016/S1672-0229(10)60008-3. Genomics Proteomics Bioinformatics. 2010. PMID: 20451164 Free PMC article.

5

Nucleotide compositional asymmetry between the leading and lagging strands of eubacterial genomes.

Qu H, Wu H, Zhang T, Zhang Z, Hu S, Yu J. Qu H, et al. Among authors: zhang t, zhang z. Res Microbiol. 2010 Dec;161(10):838-46. doi: 10.1016/j.resmic.2010.09.015. Epub 2010 Sep 22. Res Microbiol. 2010. PMID: 20868744 Free article.

6

Modeling compositional dynamics based on GC and purine contents of protein-coding sequences.

Zhang Z, Yu J. Zhang Z, et al. Biol Direct. 2010 Nov 8;5:63. doi: 10.1186/1745-6150-5-63. Biol Direct. 2010. PMID: 21059261 Free PMC article.

7

On the organizational dynamics of the genetic code.

Zhang Z, Yu J. Zhang Z, et al. Genomics Proteomics Bioinformatics. 2011 Apr;9(1-2):21-9. doi: 10.1016/S1672-0229(11)60004-1. Genomics Proteomics Bioinformatics. 2011. PMID: 21641559 Free PMC article.

8

ParaAT: a parallel tool for constructing multiple protein-coding DNA alignments.

Zhang Z, Xiao J, Wu J, Zhang H, Liu G, Wang X, Dai L. Zhang Z, et al. Among authors: zhang h. Biochem Biophys Res Commun. 2012 Mar 23;419(4):779-81. doi: 10.1016/j.bbrc.2012.02.101. Epub 2012 Feb 27. Biochem Biophys Res Commun. 2012. PMID: 22390928

9

Codon Deviation Coefficient: a novel measure for estimating codon usage bias and its statistical significance.

Zhang Z, Li J, Cui P, Ding F, Li A, Townsend JP, Yu J. Zhang Z, et al. BMC Bioinformatics. 2012 Mar 22;13:43. doi: 10.1186/1471-2105-13-43. BMC Bioinformatics. 2012. PMID: 22435713 Free PMC article.

10

Distinct contributions of replication and transcription to mutation rate variation of human genomes.

Cui P, Ding F, Lin Q, Zhang L, Li A, Zhang Z, Hu S, Yu J. Cui P, et al. Among authors: zhang l, zhang z. Genomics Proteomics Bioinformatics. 2012 Feb;10(1):4-10. doi: 10.1016/S1672-0229(11)60028-4. Genomics Proteomics Bioinformatics. 2012. PMID: 22449396 Free PMC article.

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