Satou K - Search Results

1

Inferring microRNA and transcription factor regulatory networks in heterogeneous data.

Le TD, Liu L, Liu B, Tsykin A, Goodall GJ, Satou K, Li J. Le TD, et al. Among authors: satou k. BMC Bioinformatics. 2013 Mar 11;14:92. doi: 10.1186/1471-2105-14-92. BMC Bioinformatics. 2013. PMID: 23497388 Free PMC article.

2

Finding microRNA regulatory modules in human genome using rule induction.

Tran DH, Satou K, Ho TB. Tran DH, et al. Among authors: satou k. BMC Bioinformatics. 2008 Dec 12;9 Suppl 12(Suppl 12):S5. doi: 10.1186/1471-2105-9-S12-S5. BMC Bioinformatics. 2008. PMID: 19091028 Free PMC article.

3

Computational discovery of transcriptional regulatory rules.

Pham TH, Clemente JC, Satou K, Ho TB. Pham TH, et al. Among authors: satou k. Bioinformatics. 2005 Sep 1;21 Suppl 2:ii101-7. doi: 10.1093/bioinformatics/bti1117. Bioinformatics. 2005. PMID: 16204087

4

EpicCapo: epitope prediction using combined information of amino acid pairwise contact potentials and HLA-peptide contact site information.

Saethang T, Hirose O, Kimkong I, Tran VA, Dang XT, Nguyen LA, Le TK, Kubo M, Yamada Y, Satou K. Saethang T, et al. Among authors: satou k. BMC Bioinformatics. 2012 Nov 24;13:313. doi: 10.1186/1471-2105-13-313. BMC Bioinformatics. 2012. PMID: 23176036 Free PMC article.

5

Mining yeast transcriptional regulatory modules from factor DNA-binding sites and gene expression data.

Pham TH, Satou K, Ho TB. Pham TH, et al. Among authors: satou k. Genome Inform. 2004;15(2):287-95. Genome Inform. 2004. PMID: 15706514

6

Validation of MIMGO: a method to identify differentially expressed GO terms in a microarray dataset.

Yamada Y, Sawada H, Hirotani K, Oshima M, Satou K. Yamada Y, et al. Among authors: satou k. BMC Res Notes. 2012 Dec 12;5:680. doi: 10.1186/1756-0500-5-680. BMC Res Notes. 2012. PMID: 23232071 Free PMC article.

7

Comprehensive genome-wide identification of angiosperm upstream ORFs with peptide sequences conserved in various taxonomic ranges using a novel pipeline, ESUCA.

Takahashi H, Hayashi N, Hiragori Y, Sasaki S, Motomura T, Yamashita Y, Naito S, Takahashi A, Fuse K, Satou K, Endo T, Kojima S, Onouchi H. Takahashi H, et al. Among authors: satou k. BMC Genomics. 2020 Mar 30;21(1):260. doi: 10.1186/s12864-020-6662-5. BMC Genomics. 2020. PMID: 32228449 Free PMC article.

8

Extraction of knowledge on protein-protein interaction by association rule discovery.

Oyama T, Kitano K, Satou K, Ito T. Oyama T, et al. Among authors: satou k. Bioinformatics. 2002 May;18(5):705-14. doi: 10.1093/bioinformatics/18.5.705. Bioinformatics. 2002. PMID: 12050067

9

PAAQD: Predicting immunogenicity of MHC class I binding peptides using amino acid pairwise contact potentials and quantum topological molecular similarity descriptors.

Saethang T, Hirose O, Kimkong I, Tran VA, Dang XT, Nguyen LA, Le TK, Kubo M, Yamada Y, Satou K. Saethang T, et al. Among authors: satou k. J Immunol Methods. 2013 Jan 31;387(1-2):293-302. doi: 10.1016/j.jim.2012.09.016. Epub 2012 Oct 9. J Immunol Methods. 2013. PMID: 23058674

10

Factors to preserve CpG-rich sequences in methylated CpG islands.

Miyahara H, Hirose O, Satou K, Yamada Y. Miyahara H, et al. Among authors: satou k. BMC Genomics. 2015 Feb 28;16(1):144. doi: 10.1186/s12864-015-1286-x. BMC Genomics. 2015. PMID: 25879481 Free PMC article.

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