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Page 1
Whole-genome sequences of Chlamydia trachomatis directly from clinical samples without culture.
Seth-Smith HM, Harris SR, Skilton RJ, Radebe FM, Golparian D, Shipitsyna E, Duy PT, Scott P, Cutcliffe LT, O'Neill C, Parmar S, Pitt R, Baker S, Ison CA, Marsh P, Jalal H, Lewis DA, Unemo M, Clarke IN, Parkhill J, Thomson NR. Seth-Smith HM, et al. Among authors: cutcliffe lt. Genome Res. 2013 May;23(5):855-66. doi: 10.1101/gr.150037.112. Epub 2013 Mar 22. Genome Res. 2013. PMID: 23525359 Free PMC article.
Co-evolution of genomes and plasmids within Chlamydia trachomatis and the emergence in Sweden of a new variant strain.
Seth-Smith HM, Harris SR, Persson K, Marsh P, Barron A, Bignell A, Bjartling C, Clark L, Cutcliffe LT, Lambden PR, Lennard N, Lockey SJ, Quail MA, Salim O, Skilton RJ, Wang Y, Holland MJ, Parkhill J, Thomson NR, Clarke IN. Seth-Smith HM, et al. Among authors: cutcliffe lt. BMC Genomics. 2009 May 21;10:239. doi: 10.1186/1471-2164-10-239. BMC Genomics. 2009. PMID: 19460133 Free PMC article.
The Swedish new variant of Chlamydia trachomatis: genome sequence, morphology, cell tropism and phenotypic characterization.
Unemo M, Seth-Smith HMB, Cutcliffe LT, Skilton RJ, Barlow D, Goulding D, Persson K, Harris SR, Kelly A, Bjartling C, Fredlund H, Olcén P, Thomson NR, Clarke IN. Unemo M, et al. Among authors: cutcliffe lt. Microbiology (Reading). 2010 May;156(Pt 5):1394-1404. doi: 10.1099/mic.0.036830-0. Epub 2010 Jan 21. Microbiology (Reading). 2010. PMID: 20093289 Free PMC article.
Genome sequence of the zoonotic pathogen Chlamydophila psittaci.
Seth-Smith HM, Harris SR, Rance R, West AP, Severin JA, Ossewaarde JM, Cutcliffe LT, Skilton RJ, Marsh P, Parkhill J, Clarke IN, Thomson NR. Seth-Smith HM, et al. Among authors: cutcliffe lt. J Bacteriol. 2011 Mar;193(5):1282-3. doi: 10.1128/JB.01435-10. Epub 2010 Dec 23. J Bacteriol. 2011. PMID: 21183672 Free PMC article.
Whole-genome analysis of diverse Chlamydia trachomatis strains identifies phylogenetic relationships masked by current clinical typing.
Harris SR, Clarke IN, Seth-Smith HM, Solomon AW, Cutcliffe LT, Marsh P, Skilton RJ, Holland MJ, Mabey D, Peeling RW, Lewis DA, Spratt BG, Unemo M, Persson K, Bjartling C, Brunham R, de Vries HJ, Morré SA, Speksnijder A, Bébéar CM, Clerc M, de Barbeyrac B, Parkhill J, Thomson NR. Harris SR, et al. Among authors: cutcliffe lt. Nat Genet. 2012 Mar 11;44(4):413-9, S1. doi: 10.1038/ng.2214. Nat Genet. 2012. PMID: 22406642 Free PMC article.
Chlamydia trachomatis from Australian Aboriginal people with trachoma are polyphyletic composed of multiple distinctive lineages.
Andersson P, Harris SR, Smith HMBS, Hadfield J, O'Neill C, Cutcliffe LT, Douglas FP, Asche LV, Mathews JD, Hutton SI, Sarovich DS, Tong SYC, Clarke IN, Thomson NR, Giffard PM. Andersson P, et al. Among authors: cutcliffe lt. Nat Commun. 2016 Feb 25;7:10688. doi: 10.1038/ncomms10688. Nat Commun. 2016. PMID: 26912299 Free PMC article.
Chlamydia trachomatis clinical isolates identified as tetracycline resistant do not exhibit resistance in vitro: whole-genome sequencing reveals a mutation in porB but no evidence for tetracycline resistance genes.
O'Neill CE, Seth-Smith HMB, Van Der Pol B, Harris SR, Thomson NR, Cutcliffe LT, Clarke IN. O'Neill CE, et al. Among authors: cutcliffe lt. Microbiology (Reading). 2013 Apr;159(Pt 4):748-756. doi: 10.1099/mic.0.065391-0. Epub 2013 Feb 1. Microbiology (Reading). 2013. PMID: 23378575 Free article.
Population-based analysis of ocular Chlamydia trachomatis in trachoma-endemic West African communities identifies genomic markers of disease severity.
Last AR, Pickering H, Roberts CH, Coll F, Phelan J, Burr SE, Cassama E, Nabicassa M, Seth-Smith HMB, Hadfield J, Cutcliffe LT, Clarke IN, Mabey DCW, Bailey RL, Clark TG, Thomson NR, Holland MJ. Last AR, et al. Among authors: cutcliffe lt. Genome Med. 2018 Feb 26;10(1):15. doi: 10.1186/s13073-018-0521-x. Genome Med. 2018. PMID: 29482619 Free PMC article.
18 results