Dojer N - Search Results

1

BNFinder2: Faster Bayesian network learning and Bayesian classification.

Dojer N, Bednarz P, Podsiadlo A, Wilczynski B. Dojer N, et al. Bioinformatics. 2013 Aug 15;29(16):2068-70. doi: 10.1093/bioinformatics/btt323. Epub 2013 Jul 1. Bioinformatics. 2013. PMID: 23818512 Free PMC article.

2

Applying dynamic Bayesian networks to perturbed gene expression data.

Dojer N, Gambin A, Mizera A, Wilczyński B, Tiuryn J. Dojer N, et al. BMC Bioinformatics. 2006 May 8;7:249. doi: 10.1186/1471-2105-7-249. BMC Bioinformatics. 2006. PMID: 16681847 Free PMC article.

3

BNFinder: exact and efficient method for learning Bayesian networks.

Wilczyński B, Dojer N. Wilczyński B, et al. Among authors: dojer n. Bioinformatics. 2009 Jan 15;25(2):286-7. doi: 10.1093/bioinformatics/btn505. Epub 2008 Sep 30. Bioinformatics. 2009. PMID: 18826957 Free PMC article.

4

Finding evolutionarily conserved cis-regulatory modules with a universal set of motifs.

Wilczynski B, Dojer N, Patelak M, Tiuryn J. Wilczynski B, et al. Among authors: dojer n. BMC Bioinformatics. 2009 Mar 10;10:82. doi: 10.1186/1471-2105-10-82. BMC Bioinformatics. 2009. PMID: 19284541 Free PMC article.

5

Optimally choosing PWM motif databases and sequence scanning approaches based on ChIP-seq data.

Dabrowski M, Dojer N, Krystkowiak I, Kaminska B, Wilczynski B. Dabrowski M, et al. Among authors: dojer n. BMC Bioinformatics. 2015 May 1;16:140. doi: 10.1186/s12859-015-0573-5. BMC Bioinformatics. 2015. PMID: 25927199 Free PMC article.

6

RECORD: Reference-Assisted Genome Assembly for Closely Related Genomes.

Buza K, Wilczynski B, Dojer N. Buza K, et al. Among authors: dojer n. Int J Genomics. 2015;2015:563482. doi: 10.1155/2015/563482. Epub 2015 Oct 19. Int J Genomics. 2015. PMID: 26558255 Free PMC article.

7

Bi-billboard: symmetrization and careful choice of informant species results in higher accuracy of regulatory element prediction.

Dojer N, Biecek P, Tiuryn J. Dojer N, et al. J Comput Biol. 2011 Jun;18(6):809-19. doi: 10.1089/cmb.2010.0299. Epub 2011 May 12. J Comput Biol. 2011. PMID: 21563976

8

Comparative analysis of cis-regulation following stroke and seizures in subspaces of conserved eigensystems.

Dabrowski M, Dojer N, Zawadzka M, Mieczkowski J, Kaminska B. Dabrowski M, et al. Among authors: dojer n. BMC Syst Biol. 2010 Jun 17;4:86. doi: 10.1186/1752-0509-4-86. BMC Syst Biol. 2010. PMID: 20565733 Free PMC article.

9

Getting insight into the pan-genome structure with PangTree.

Dziadkiewicz P, Dojer N. Dziadkiewicz P, et al. Among authors: dojer n. BMC Genomics. 2020 Apr 16;21(Suppl 2):274. doi: 10.1186/s12864-020-6610-4. BMC Genomics. 2020. PMID: 32299360 Free PMC article.

10

A probabilistic approach to learn chromatin architecture and accurate inference of the NF-κB/RelA regulatory network using ChIP-Seq.

Yang J, Mitra A, Dojer N, Fu S, Rowicka M, Brasier AR. Yang J, et al. Among authors: dojer n. Nucleic Acids Res. 2013 Aug;41(15):7240-59. doi: 10.1093/nar/gkt493. Epub 2013 Jun 14. Nucleic Acids Res. 2013. PMID: 23771139 Free PMC article.

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