Schaap PJ - Search Results

1

Genome-scale metabolic model for Lactococcus lactis MG1363 and its application to the analysis of flavor formation.

Flahaut NA, Wiersma A, van de Bunt B, Martens DE, Schaap PJ, Sijtsma L, Dos Santos VA, de Vos WM. Flahaut NA, et al. Among authors: schaap pj. Appl Microbiol Biotechnol. 2013 Oct;97(19):8729-39. doi: 10.1007/s00253-013-5140-2. Epub 2013 Aug 24. Appl Microbiol Biotechnol. 2013. PMID: 23974365

2

An iterative workflow for mining the human intestinal metaproteome.

Rooijers K, Kolmeder C, Juste C, Doré J, de Been M, Boeren S, Galan P, Beauvallet C, de Vos WM, Schaap PJ. Rooijers K, et al. Among authors: schaap pj. BMC Genomics. 2011 Jan 5;12:6. doi: 10.1186/1471-2164-12-6. BMC Genomics. 2011. PMID: 21208423 Free PMC article.

3

Genome and proteome analysis of Pseudomonas chloritidismutans AW-1^T that grows on n-decane with chlorate or oxygen as electron acceptor.

Mehboob F, Oosterkamp MJ, Koehorst JJ, Farrakh S, Veuskens T, Plugge CM, Boeren S, de Vos WM, Schraa G, Stams AJ, Schaap PJ. Mehboob F, et al. Among authors: schaap pj. Environ Microbiol. 2016 Oct;18(10):3247-3257. doi: 10.1111/1462-2920.12880. Epub 2015 Jun 5. Environ Microbiol. 2016. PMID: 25900248

4

Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis.

Visser M, Pieterse MM, Pinkse MW, Nijsse B, Verhaert PD, de Vos WM, Schaap PJ, Stams AJ. Visser M, et al. Among authors: schaap pj. Environ Microbiol. 2016 Sep;18(9):2843-55. doi: 10.1111/1462-2920.12973. Epub 2015 Aug 11. Environ Microbiol. 2016. PMID: 26147498

5

Complete genome sequence of thermophilic Bacillus smithii type strain DSM 4216(T).

Bosma EF, Koehorst JJ, van Hijum SA, Renckens B, Vriesendorp B, van de Weijer AH, Schaap PJ, de Vos WM, van der Oost J, van Kranenburg R. Bosma EF, et al. Among authors: schaap pj. Stand Genomic Sci. 2016 Aug 24;11(1):52. doi: 10.1186/s40793-016-0172-8. eCollection 2016. Stand Genomic Sci. 2016. PMID: 27559429 Free PMC article.

6

Complete Genome Sequence of Akkermansia glycaniphila Strain PytT, a Mucin-Degrading Specialist of the Reticulated Python Gut.

Ouwerkerk JP, Koehorst JJ, Schaap PJ, Ritari J, Paulin L, Belzer C, de Vos WM. Ouwerkerk JP, et al. Among authors: schaap pj. Genome Announc. 2017 Jan 5;5(1):e01098-16. doi: 10.1128/genomeA.01098-16. Genome Announc. 2017. PMID: 28057747 Free PMC article.

7

Draft Genome Sequence of the Oleaginous Green Alga Tetradesmus obliquus UTEX 393.

Carreres BM, de Jaeger L, Springer J, Barbosa MJ, Breuer G, van den End EJ, Kleinegris DM, Schäffers I, Wolbert EJ, Zhang H, Lamers PP, Draaisma RB, Martins Dos Santos VA, Wijffels RH, Eggink G, Schaap PJ, Martens DE. Carreres BM, et al. Among authors: schaap pj. Genome Announc. 2017 Jan 19;5(3):e01449-16. doi: 10.1128/genomeA.01449-16. Genome Announc. 2017. PMID: 28104651 Free PMC article.

8

Metabolic modeling of energy balances in Mycoplasma hyopneumoniae shows that pyruvate addition increases growth rate.

Kamminga T, Slagman SJ, Bijlsma JJE, Martins Dos Santos VAP, Suarez-Diez M, Schaap PJ. Kamminga T, et al. Among authors: schaap pj. Biotechnol Bioeng. 2017 Oct;114(10):2339-2347. doi: 10.1002/bit.26347. Epub 2017 Jul 27. Biotechnol Bioeng. 2017. PMID: 28600895 Free PMC article.

9

Genome-Scale Model and Omics Analysis of Metabolic Capacities of Akkermansia muciniphila Reveal a Preferential Mucin-Degrading Lifestyle.

Ottman N, Davids M, Suarez-Diez M, Boeren S, Schaap PJ, Martins Dos Santos VAP, Smidt H, Belzer C, de Vos WM. Ottman N, et al. Among authors: schaap pj. Appl Environ Microbiol. 2017 Aug 31;83(18):e01014-17. doi: 10.1128/AEM.01014-17. Print 2017 Sep 15. Appl Environ Microbiol. 2017. PMID: 28687644 Free PMC article.

10

Genomic and functional analysis of Romboutsia ilealis CRIB^T reveals adaptation to the small intestine.

Gerritsen J, Hornung B, Renckens B, van Hijum SAFT, Martins Dos Santos VAP, Rijkers GT, Schaap PJ, de Vos WM, Smidt H. Gerritsen J, et al. Among authors: schaap pj. PeerJ. 2017 Sep 11;5:e3698. doi: 10.7717/peerj.3698. eCollection 2017. PeerJ. 2017. PMID: 28924494 Free PMC article.

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