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Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers.
Varshney RK, Chen W, Li Y, Bharti AK, Saxena RK, Schlueter JA, Donoghue MT, Azam S, Fan G, Whaley AM, Farmer AD, Sheridan J, Iwata A, Tuteja R, Penmetsa RV, Wu W, Upadhyaya HD, Yang SP, Shah T, Saxena KB, Michael T, McCombie WR, Yang B, Zhang G, Yang H, Wang J, Spillane C, Cook DR, May GD, Xu X, Jackson SA. Varshney RK, et al. Nat Biotechnol. 2011 Nov 6;30(1):83-9. doi: 10.1038/nbt.2022. Nat Biotechnol. 2011. PMID: 22057054
Coverage-based consensus calling (CbCC) of short sequence reads and comparison of CbCC results to identify SNPs in chickpea (Cicer arietinum; Fabaceae), a crop species without a reference genome.
Azam S, Thakur V, Ruperao P, Shah T, Balaji J, Amindala B, Farmer AD, Studholme DJ, May GD, Edwards D, Jones JD, Varshney RK. Azam S, et al. Among authors: varshney rk. Am J Bot. 2012 Feb;99(2):186-92. doi: 10.3732/ajb.1100419. Epub 2012 Feb 1. Am J Bot. 2012. PMID: 22301893 Free article.
Large-scale development of cost-effective SNP marker assays for diversity assessment and genetic mapping in chickpea and comparative mapping in legumes.
Hiremath PJ, Kumar A, Penmetsa RV, Farmer A, Schlueter JA, Chamarthi SK, Whaley AM, Carrasquilla-Garcia N, Gaur PM, Upadhyaya HD, Kavi Kishor PB, Shah TM, Cook DR, Varshney RK. Hiremath PJ, et al. Among authors: varshney rk. Plant Biotechnol J. 2012 Aug;10(6):716-32. doi: 10.1111/j.1467-7652.2012.00710.x. Epub 2012 Jun 16. Plant Biotechnol J. 2012. PMID: 22703242 Free PMC article.
Deep sequencing analysis of the transcriptomes of peanut aerial and subterranean young pods identifies candidate genes related to early embryo abortion.
Chen X, Zhu W, Azam S, Li H, Zhu F, Li H, Hong Y, Liu H, Zhang E, Wu H, Yu S, Zhou G, Li S, Zhong N, Wen S, Li X, Knapp SJ, Ozias-Akins P, Varshney RK, Liang X. Chen X, et al. Among authors: varshney rk. Plant Biotechnol J. 2013 Jan;11(1):115-27. doi: 10.1111/pbi.12018. Epub 2012 Nov 6. Plant Biotechnol J. 2013. PMID: 23130888 Free article.
Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement.
Varshney RK, Song C, Saxena RK, Azam S, Yu S, Sharpe AG, Cannon S, Baek J, Rosen BD, Tar'an B, Millan T, Zhang X, Ramsay LD, Iwata A, Wang Y, Nelson W, Farmer AD, Gaur PM, Soderlund C, Penmetsa RV, Xu C, Bharti AK, He W, Winter P, Zhao S, Hane JK, Carrasquilla-Garcia N, Condie JA, Upadhyaya HD, Luo MC, Thudi M, Gowda CL, Singh NP, Lichtenzveig J, Gali KK, Rubio J, Nadarajan N, Dolezel J, Bansal KC, Xu X, Edwards D, Zhang G, Kahl G, Gil J, Singh KB, Datta SK, Jackson SA, Wang J, Cook DR. Varshney RK, et al. Nat Biotechnol. 2013 Mar;31(3):240-6. doi: 10.1038/nbt.2491. Epub 2013 Jan 27. Nat Biotechnol. 2013. PMID: 23354103 Free article.
Groundnut improvement: use of genetic and genomic tools.
Janila P, Nigam SN, Pandey MK, Nagesh P, Varshney RK. Janila P, et al. Among authors: varshney rk. Front Plant Sci. 2013 Feb 25;4:23. doi: 10.3389/fpls.2013.00023. eCollection 2013. Front Plant Sci. 2013. PMID: 23443056 Free PMC article.
590 results