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The genome portal of the Department of Energy Joint Genome Institute: 2014 updates.
Nordberg H, Cantor M, Dusheyko S, Hua S, Poliakov A, Shabalov I, Smirnova T, Grigoriev IV, Dubchak I. Nordberg H, et al. Among authors: dubchak i. Nucleic Acids Res. 2014 Jan;42(Database issue):D26-31. doi: 10.1093/nar/gkt1069. Epub 2013 Nov 12. Nucleic Acids Res. 2014. PMID: 24225321 Free PMC article.
The genome portal of the Department of Energy Joint Genome Institute.
Grigoriev IV, Nordberg H, Shabalov I, Aerts A, Cantor M, Goodstein D, Kuo A, Minovitsky S, Nikitin R, Ohm RA, Otillar R, Poliakov A, Ratnere I, Riley R, Smirnova T, Rokhsar D, Dubchak I. Grigoriev IV, et al. Among authors: dubchak i. Nucleic Acids Res. 2012 Jan;40(Database issue):D26-32. doi: 10.1093/nar/gkr947. Epub 2011 Nov 22. Nucleic Acids Res. 2012. PMID: 22110030 Free PMC article.
MycoCosm portal: gearing up for 1000 fungal genomes.
Grigoriev IV, Nikitin R, Haridas S, Kuo A, Ohm R, Otillar R, Riley R, Salamov A, Zhao X, Korzeniewski F, Smirnova T, Nordberg H, Dubchak I, Shabalov I. Grigoriev IV, et al. Among authors: dubchak i. Nucleic Acids Res. 2014 Jan;42(Database issue):D699-704. doi: 10.1093/nar/gkt1183. Epub 2013 Dec 1. Nucleic Acids Res. 2014. PMID: 24297253 Free PMC article.
VISTA: computational tools for comparative genomics.
Frazer KA, Pachter L, Poliakov A, Rubin EM, Dubchak I. Frazer KA, et al. Among authors: dubchak i. Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W273-9. doi: 10.1093/nar/gkh458. Nucleic Acids Res. 2004. PMID: 15215394 Free PMC article.
Visualizing genomes: techniques and challenges.
Nielsen CB, Cantor M, Dubchak I, Gordon D, Wang T. Nielsen CB, et al. Among authors: dubchak i. Nat Methods. 2010 Mar;7(3 Suppl):S5-S15. doi: 10.1038/nmeth.1422. Epub 2010 Feb 25. Nat Methods. 2010. PMID: 20195257 Review.
The genome of the Western clawed frog Xenopus tropicalis.
Hellsten U, Harland RM, Gilchrist MJ, Hendrix D, Jurka J, Kapitonov V, Ovcharenko I, Putnam NH, Shu S, Taher L, Blitz IL, Blumberg B, Dichmann DS, Dubchak I, Amaya E, Detter JC, Fletcher R, Gerhard DS, Goodstein D, Graves T, Grigoriev IV, Grimwood J, Kawashima T, Lindquist E, Lucas SM, Mead PE, Mitros T, Ogino H, Ohta Y, Poliakov AV, Pollet N, Robert J, Salamov A, Sater AK, Schmutz J, Terry A, Vize PD, Warren WC, Wells D, Wills A, Wilson RK, Zimmerman LB, Zorn AM, Grainger R, Grammer T, Khokha MK, Richardson PM, Rokhsar DS. Hellsten U, et al. Among authors: dubchak i. Science. 2010 Apr 30;328(5978):633-6. doi: 10.1126/science.1183670. Science. 2010. PMID: 20431018 Free PMC article.
Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon.
Magain N, Miadlikowska J, Mueller O, Gajdeczka M, Truong C, Salamov AA, Dubchak I, Grigoriev IV, Goffinet B, Sérusiaux E, Lutzoni F. Magain N, et al. Among authors: dubchak i. Mol Phylogenet Evol. 2017 Dec;117:10-29. doi: 10.1016/j.ympev.2017.08.013. Epub 2017 Aug 30. Mol Phylogenet Evol. 2017. PMID: 28860010 Free article.
113 results