Garud NR - Search Results

1

Genomic inference accurately predicts the timing and severity of a recent bottleneck in a nonmodel insect population.

McCoy RC, Garud NR, Kelley JL, Boggs CL, Petrov DA. McCoy RC, et al. Among authors: garud nr. Mol Ecol. 2014 Jan;23(1):136-50. doi: 10.1111/mec.12591. Epub 2013 Dec 5. Mol Ecol. 2014. PMID: 24237665 Free PMC article.

2

Recent selective sweeps in North American Drosophila melanogaster show signatures of soft sweeps.

Garud NR, Messer PW, Buzbas EO, Petrov DA. Garud NR, et al. PLoS Genet. 2015 Feb 23;11(2):e1005004. doi: 10.1371/journal.pgen.1005004. eCollection 2015 Feb. PLoS Genet. 2015. PMID: 25706129 Free PMC article.

3

The population genetics of drug resistance evolution in natural populations of viral, bacterial and eukaryotic pathogens.

Wilson BA, Garud NR, Feder AF, Assaf ZJ, Pennings PS. Wilson BA, et al. Among authors: garud nr. Mol Ecol. 2016 Jan;25(1):42-66. doi: 10.1111/mec.13474. Epub 2015 Dec 17. Mol Ecol. 2016. PMID: 26578204 Free PMC article. Review.

4

Elevated Linkage Disequilibrium and Signatures of Soft Sweeps Are Common in Drosophila melanogaster.

Garud NR, Petrov DA. Garud NR, et al. Genetics. 2016 Jun;203(2):863-80. doi: 10.1534/genetics.115.184002. Epub 2016 Apr 20. Genetics. 2016. PMID: 27098909 Free PMC article.

5

Genetic Adaptation in New York City Rats.

Harpak A, Garud N, Rosenberg NA, Petrov DA, Combs M, Pennings PS, Munshi-South J. Harpak A, et al. Genome Biol Evol. 2021 Jan 7;13(1):evaa247. doi: 10.1093/gbe/evaa247. Genome Biol Evol. 2021. PMID: 33211096 Free PMC article.

6

Detection of hard and soft selective sweeps from Drosophila melanogaster population genomic data.

Garud NR, Messer PW, Petrov DA. Garud NR, et al. PLoS Genet. 2021 Feb 26;17(2):e1009373. doi: 10.1371/journal.pgen.1009373. eCollection 2021 Feb. PLoS Genet. 2021. PMID: 33635910 Free PMC article.

7

Enhancing the mathematical properties of new haplotype homozygosity statistics for the detection of selective sweeps.

Garud NR, Rosenberg NA. Garud NR, et al. Theor Popul Biol. 2015 Jun;102:94-101. doi: 10.1016/j.tpb.2015.04.001. Epub 2015 Apr 16. Theor Popul Biol. 2015. PMID: 25891325 Free PMC article.

8

Detection and Classification of Hard and Soft Sweeps from Unphased Genotypes by Multilocus Genotype Identity.

Harris AM, Garud NR, DeGiorgio M. Harris AM, et al. Among authors: garud nr. Genetics. 2018 Dec;210(4):1429-1452. doi: 10.1534/genetics.118.301502. Epub 2018 Oct 12. Genetics. 2018. PMID: 30315068 Free PMC article.

9

Population Genetics in the Human Microbiome.

Garud NR, Pollard KS. Garud NR, et al. Trends Genet. 2020 Jan;36(1):53-67. doi: 10.1016/j.tig.2019.10.010. Epub 2019 Nov 25. Trends Genet. 2020. PMID: 31780057 Free article. Review.

10

Longitudinal linked-read sequencing reveals ecological and evolutionary responses of a human gut microbiome during antibiotic treatment.

Roodgar M, Good BH, Garud NR, Martis S, Avula M, Zhou W, Lancaster SM, Lee H, Babveyh A, Nesamoney S, Pollard KS, Snyder MP. Roodgar M, et al. Among authors: garud nr. Genome Res. 2021 Aug;31(8):1433-1446. doi: 10.1101/gr.265058.120. Epub 2021 Jul 22. Genome Res. 2021. PMID: 34301627 Free PMC article.

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