Jörnsten R - Search Results

1

DNA methylation changes separate allergic patients from healthy controls and may reflect altered CD4+ T-cell population structure.

Nestor CE, Barrenäs F, Wang H, Lentini A, Zhang H, Bruhn S, Jörnsten R, Langston MA, Rogers G, Gustafsson M, Benson M. Nestor CE, et al. Among authors: jornsten r. PLoS Genet. 2014 Jan;10(1):e1004059. doi: 10.1371/journal.pgen.1004059. Epub 2014 Jan 2. PLoS Genet. 2014. PMID: 24391521 Free PMC article.

2

Highly interconnected genes in disease-specific networks are enriched for disease-associated polymorphisms.

Barrenäs F, Chavali S, Alves AC, Coin L, Jarvelin MR, Jörnsten R, Langston MA, Ramasamy A, Rogers G, Wang H, Benson M. Barrenäs F, et al. Among authors: jornsten r. Genome Biol. 2012 Jun 15;13(6):R46. doi: 10.1186/gb-2012-13-6-r46. Genome Biol. 2012. PMID: 22703998 Free PMC article.

3

LASSIM-A network inference toolbox for genome-wide mechanistic modeling.

Magnusson R, Mariotti GP, Köpsén M, Lövfors W, Gawel DR, Jörnsten R, Linde J, Nordling TEM, Nyman E, Schulze S, Nestor CE, Zhang H, Cedersund G, Benson M, Tjärnberg A, Gustafsson M. Magnusson R, et al. Among authors: jornsten r. PLoS Comput Biol. 2017 Jun 22;13(6):e1005608. doi: 10.1371/journal.pcbi.1005608. eCollection 2017 Jun. PLoS Comput Biol. 2017. PMID: 28640810 Free PMC article.

4

Digital twins to personalize medicine.

Björnsson B, Borrebaeck C, Elander N, Gasslander T, Gawel DR, Gustafsson M, Jörnsten R, Lee EJ, Li X, Lilja S, Martínez-Enguita D, Matussek A, Sandström P, Schäfer S, Stenmarker M, Sun XF, Sysoev O, Zhang H, Benson M; Swedish Digital Twin Consortium. Björnsson B, et al. Among authors: jornsten r. Genome Med. 2019 Dec 31;12(1):4. doi: 10.1186/s13073-019-0701-3. Genome Med. 2019. PMID: 31892363 Free PMC article.

5

Generation and analysis of context-specific genome-scale metabolic models derived from single-cell RNA-Seq data.

Gustafsson J, Anton M, Roshanzamir F, Jörnsten R, Kerkhoven EJ, Robinson JL, Nielsen J. Gustafsson J, et al. Among authors: jornsten r. Proc Natl Acad Sci U S A. 2023 Feb 7;120(6):e2217868120. doi: 10.1073/pnas.2217868120. Epub 2023 Jan 31. Proc Natl Acad Sci U S A. 2023. PMID: 36719923 Free PMC article.

6

Network modeling of the transcriptional effects of copy number aberrations in glioblastoma.

Jörnsten R, Abenius T, Kling T, Schmidt L, Johansson E, Nordling TE, Nordlander B, Sander C, Gennemark P, Funa K, Nilsson B, Lindahl L, Nelander S. Jörnsten R, et al. Mol Syst Biol. 2011 Apr 26;7:486. doi: 10.1038/msb.2011.17. Mol Syst Biol. 2011. PMID: 21525872 Free PMC article.

7

The Cancer Genome Atlas Pan-Cancer analysis project.

Cancer Genome Atlas Research Network; Weinstein JN, Collisson EA, Mills GB, Shaw KR, Ozenberger BA, Ellrott K, Shmulevich I, Sander C, Stuart JM. Cancer Genome Atlas Research Network, et al. Nat Genet. 2013 Oct;45(10):1113-20. doi: 10.1038/ng.2764. Nat Genet. 2013. PMID: 24071849 Free PMC article.

8

Integrative Modeling Reveals Annexin A2-mediated Epigenetic Control of Mesenchymal Glioblastoma.

Kling T, Ferrarese R, Ó hAilín D, Johansson P, Heiland DH, Dai F, Vasilikos I, Weyerbrock A, Jörnsten R, Carro MS, Nelander S. Kling T, et al. Among authors: jornsten r. EBioMedicine. 2016 Oct;12:72-85. doi: 10.1016/j.ebiom.2016.08.050. Epub 2016 Sep 18. EBioMedicine. 2016. PMID: 27667176 Free PMC article.

9

System-scale network modeling of cancer using EPoC.

Abenius T, Jörnsten R, Kling T, Schmidt L, Sánchez J, Nelander S. Abenius T, et al. Among authors: jornsten r. Adv Exp Med Biol. 2012;736:617-43. doi: 10.1007/978-1-4419-7210-1_37. Adv Exp Med Biol. 2012. PMID: 22161356

10

Molecular natural history of breast cancer: Leveraging transcriptomics to predict breast cancer progression and aggressiveness.

Cook DJ, Kallus J, Jörnsten R, Nielsen J. Cook DJ, et al. Among authors: jornsten r. Cancer Med. 2020 May;9(10):3551-3562. doi: 10.1002/cam4.2996. Epub 2020 Mar 23. Cancer Med. 2020. PMID: 32207233 Free PMC article.

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