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Page 1
Genome sequence of the Leisingera aquimarina type strain (DSM 24565(T)), a member of the marine Roseobacter clade rich in extrachromosomal elements.
Riedel T, Teshima H, Petersen J, Fiebig A, Davenport K, Daligault H, Erkkila T, Gu W, Munk C, Xu Y, Chen A, Pati A, Ivanova N, Goodwin LA, Chain P, Detter JC, Rohde M, Gronow S, Kyrpides NC, Woyke T, Göker M, Brinkhoff T, Klenk HP. Riedel T, et al. Among authors: erkkila t. Stand Genomic Sci. 2013 Jul 30;8(3):389-402. doi: 10.4056/sigs.3858183. eCollection 2013 Jul 30. Stand Genomic Sci. 2013. PMID: 24501625 Free PMC article.
Genomic comparison of Escherichia coli O104:H4 isolates from 2009 and 2011 reveals plasmid, and prophage heterogeneity, including shiga toxin encoding phage stx2.
Ahmed SA, Awosika J, Baldwin C, Bishop-Lilly KA, Biswas B, Broomall S, Chain PS, Chertkov O, Chokoshvili O, Coyne S, Davenport K, Detter JC, Dorman W, Erkkila TH, Folster JP, Frey KG, George M, Gleasner C, Henry M, Hill KK, Hubbard K, Insalaco J, Johnson S, Kitzmiller A, Krepps M, Lo CC, Luu T, McNew LA, Minogue T, Munk CA, Osborne B, Patel M, Reitenga KG, Rosenzweig CN, Shea A, Shen X, Strockbine N, Tarr C, Teshima H, van Gieson E, Verratti K, Wolcott M, Xie G, Sozhamannan S, Gibbons HS; Threat Characterization Consortium. Ahmed SA, et al. Among authors: erkkila th. PLoS One. 2012;7(11):e48228. doi: 10.1371/journal.pone.0048228. Epub 2012 Nov 1. PLoS One. 2012. PMID: 23133618 Free PMC article.
Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United States Great Basin.
Murugapiran SK, Huntemann M, Wei CL, Han J, Detter JC, Han CS, Erkkila TH, Teshima H, Chen A, Kyrpides N, Mavrommatis K, Markowitz V, Szeto E, Ivanova N, Pagani I, Lam J, McDonald AI, Dodsworth JA, Pati A, Goodwin L, Peters L, Pitluck S, Woyke T, Hedlund BP. Murugapiran SK, et al. Among authors: erkkila th. Genome Announc. 2013 Jan;1(1):e00106-12. doi: 10.1128/genomeA.00106-12. Epub 2013 Jan 24. Genome Announc. 2013. PMID: 23405355 Free PMC article.
Draft Genome Sequence of Methylomicrobium buryatense Strain 5G, a Haloalkaline-Tolerant Methanotrophic Bacterium.
Khmelenina VN, Beck DA, Munk C, Davenport K, Daligault H, Erkkila T, Goodwin L, Gu W, Lo CC, Scholz M, Teshima H, Xu Y, Chain P, Bringel F, Vuilleumier S, Dispirito A, Dunfield P, Jetten MS, Klotz MG, Knief C, Murrell JC, Op den Camp HJ, Sakai Y, Semrau J, Svenning M, Stein LY, Trotsenko YA, Kalyuzhnaya MG. Khmelenina VN, et al. Among authors: erkkila t. Genome Announc. 2013 Jun 27;1(4):e00053-13. doi: 10.1128/genomeA.00053-13. Genome Announc. 2013. PMID: 23814105 Free PMC article.
Thermus oshimai JL-2 and T. thermophilus JL-18 genome analysis illuminates pathways for carbon, nitrogen, and sulfur cycling.
Murugapiran SK, Huntemann M, Wei CL, Han J, Detter JC, Han C, Erkkila TH, Teshima H, Chen A, Kyrpides N, Mavrommatis K, Markowitz V, Szeto E, Ivanova N, Pagani I, Pati A, Goodwin L, Peters L, Pitluck S, Lam J, McDonald AI, Dodsworth JA, Woyke T, Hedlund BP. Murugapiran SK, et al. Among authors: erkkila th. Stand Genomic Sci. 2013 Feb 25;7(3):449-68. doi: 10.4056/sigs.3667269. eCollection 2013. Stand Genomic Sci. 2013. PMID: 24019992 Free PMC article.
Non-contiguous finished genome sequence of plant-growth promoting Serratia proteamaculans S4.
Neupane S, Goodwin LA, Högberg N, Kyrpides NC, Alström S, Bruce D, Quintana B, Munk C, Daligault H, Teshima H, Davenport K, Reitenga K, Green L, Chain P, Erkkila T, Gu W, Zhang X, Xu Y, Kunde Y, Chertkov O, Han J, Han C, Detter JC, Ivanova N, Pati A, Chen A, Szeto E, Mavromatis K, Huntemann M, Nolan M, Pitluck S, Deshpande S, Markowitz V, Pagani I, Klenk HP, Woyke T, Finlay RD. Neupane S, et al. Among authors: erkkila t. Stand Genomic Sci. 2013 Jul 30;8(3):441-9. doi: 10.4056/sigs.4027757. eCollection 2013 Jul 30. Stand Genomic Sci. 2013. PMID: 24501629 Free PMC article.
Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain SRDI943.
Reeve W, Drew E, Ballard R, Melino V, Tian R, De Meyer S, Brau L, Ninawi M, Daligault H, Davenport K, Erkkila T, Goodwin L, Gu W, Munk C, Teshima H, Xu Y, Chain P, Kyrpides N. Reeve W, et al. Among authors: erkkila t. Stand Genomic Sci. 2013 Dec 15;9(2):232-42. doi: 10.4056/sigs.4478252. eCollection 2013 Dec 20. Stand Genomic Sci. 2013. PMID: 24976880 Free PMC article.
Complete genome sequence of Enterobacter sp. IIT-BT 08: A potential microbial strain for high rate hydrogen production.
Khanna N, Ghosh AK, Huntemann M, Deshpande S, Han J, Chen A, Kyrpides N, Mavrommatis K, Szeto E, Markowitz V, Ivanova N, Pagani I, Pati A, Pitluck S, Nolan M, Woyke T, Teshima H, Chertkov O, Daligault H, Davenport K, Gu W, Munk C, Zhang X, Bruce D, Detter C, Xu Y, Quintana B, Reitenga K, Kunde Y, Green L, Erkkila T, Han C, Brambilla EM, Lang E, Klenk HP, Goodwin L, Chain P, Das D. Khanna N, et al. Among authors: erkkila t. Stand Genomic Sci. 2013 Dec 15;9(2):359-69. doi: 10.4056/sigs.4348035. eCollection 2013 Dec 20. Stand Genomic Sci. 2013. PMID: 24976892 Free PMC article.
Genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain NZP2037.
Kelly S, Sullivan J, Ronson C, Tian R, Bräu L, Davenport K, Daligault H, Erkkila T, Goodwin L, Gu W, Munk C, Teshima H, Xu Y, Chain P, Woyke T, Liolios K, Pati A, Mavromatis K, Markowitz V, Ivanova N, Kyrpides N, Reeve W. Kelly S, et al. Among authors: erkkila t. Stand Genomic Sci. 2014 Dec 8;9:7. doi: 10.1186/1944-3277-9-7. eCollection 2014. Stand Genomic Sci. 2014. PMID: 25780500 Free PMC article.
25 results