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Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche.
Morin E, Kohler A, Baker AR, Foulongne-Oriol M, Lombard V, Nagy LG, Ohm RA, Patyshakuliyeva A, Brun A, Aerts AL, Bailey AM, Billette C, Coutinho PM, Deakin G, Doddapaneni H, Floudas D, Grimwood J, Hildén K, Kües U, Labutti KM, Lapidus A, Lindquist EA, Lucas SM, Murat C, Riley RW, Salamov AA, Schmutz J, Subramanian V, Wösten HA, Xu J, Eastwood DC, Foster GD, Sonnenberg AS, Cullen D, de Vries RP, Lundell T, Hibbett DS, Henrissat B, Burton KS, Kerrigan RW, Challen MP, Grigoriev IV, Martin F. Morin E, et al. Among authors: de vries rp. Proc Natl Acad Sci U S A. 2012 Oct 23;109(43):17501-6. doi: 10.1073/pnas.1206847109. Epub 2012 Oct 8. Proc Natl Acad Sci U S A. 2012. PMID: 23045686 Free PMC article.
Carbohydrate utilization and metabolism is highly differentiated in Agaricus bisporus.
Patyshakuliyeva A, Jurak E, Kohler A, Baker A, Battaglia E, de Bruijn W, Burton KS, Challen MP, Coutinho PM, Eastwood DC, Gruben BS, Mäkelä MR, Martin F, Nadal M, van den Brink J, Wiebenga A, Zhou M, Henrissat B, Kabel M, Gruppen H, de Vries RP. Patyshakuliyeva A, et al. Among authors: de bruijn w, de vries rp. BMC Genomics. 2013 Sep 30;14:663. doi: 10.1186/1471-2164-14-663. BMC Genomics. 2013. PMID: 24074284 Free PMC article.
Plant biomass degradation by fungi.
Mäkelä MR, Donofrio N, de Vries RP. Mäkelä MR, et al. Among authors: de vries rp. Fungal Genet Biol. 2014 Nov;72:2-9. doi: 10.1016/j.fgb.2014.08.010. Epub 2014 Sep 3. Fungal Genet Biol. 2014. PMID: 25192611
Plant-polysaccharide-degrading enzymes from Basidiomycetes.
Rytioja J, Hildén K, Yuzon J, Hatakka A, de Vries RP, Mäkelä MR. Rytioja J, et al. Among authors: de vries rp. Microbiol Mol Biol Rev. 2014 Dec;78(4):614-49. doi: 10.1128/MMBR.00035-14. Microbiol Mol Biol Rev. 2014. PMID: 25428937 Free PMC article. Review.
Closely related fungi employ diverse enzymatic strategies to degrade plant biomass.
Benoit I, Culleton H, Zhou M, DiFalco M, Aguilar-Osorio G, Battaglia E, Bouzid O, Brouwer CPJM, El-Bushari HBO, Coutinho PM, Gruben BS, Hildén KS, Houbraken J, Barboza LAJ, Levasseur A, Majoor E, Mäkelä MR, Narang HM, Trejo-Aguilar B, van den Brink J, vanKuyk PA, Wiebenga A, McKie V, McCleary B, Tsang A, Henrissat B, de Vries RP. Benoit I, et al. Among authors: de vries rp. Biotechnol Biofuels. 2015 Aug 1;8:107. doi: 10.1186/s13068-015-0285-0. eCollection 2015. Biotechnol Biofuels. 2015. PMID: 26236396 Free PMC article.
352 results