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Whole-genome sequencing of cultivated and wild peppers provides insights into Capsicum domestication and specialization.
Qin C, Yu C, Shen Y, Fang X, Chen L, Min J, Cheng J, Zhao S, Xu M, Luo Y, Yang Y, Wu Z, Mao L, Wu H, Ling-Hu C, Zhou H, Lin H, González-Morales S, Trejo-Saavedra DL, Tian H, Tang X, Zhao M, Huang Z, Zhou A, Yao X, Cui J, Li W, Chen Z, Feng Y, Niu Y, Bi S, Yang X, Li W, Cai H, Luo X, Montes-Hernández S, Leyva-González MA, Xiong Z, He X, Bai L, Tan S, Tang X, Liu D, Liu J, Zhang S, Chen M, Zhang L, Zhang L, Zhang Y, Liao W, Zhang Y, Wang M, Lv X, Wen B, Liu H, Luan H, Zhang Y, Yang S, Wang X, Xu J, Li X, Li S, Wang J, Palloix A, Bosland PW, Li Y, Krogh A, Rivera-Bustamante RF, Herrera-Estrella L, Yin Y, Yu J, Hu K, Zhang Z. Qin C, et al. Among authors: zhao s, zhao m. Proc Natl Acad Sci U S A. 2014 Apr 8;111(14):5135-40. doi: 10.1073/pnas.1400975111. Epub 2014 Mar 3. Proc Natl Acad Sci U S A. 2014. PMID: 24591624 Free PMC article.
Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation.
Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu P, Wang J, Zou H, Zhang R, Xu J, Gao J, Middleton C, Quan Z, Liu G, Wang J; International Wheat Genome Sequencing Consortium; Yang H, Liu X, He Z, Mao L, Wang J. Jia J, et al. Among authors: zhao g, zhao s. Nature. 2013 Apr 4;496(7443):91-5. doi: 10.1038/nature12028. Epub 2013 Mar 24. Nature. 2013. PMID: 23535592 Free article.
Dissecting yield-associated loci in super hybrid rice by resequencing recombinant inbred lines and improving parental genome sequences.
Gao ZY, Zhao SC, He WM, Guo LB, Peng YL, Wang JJ, Guo XS, Zhang XM, Rao YC, Zhang C, Dong GJ, Zheng FY, Lu CX, Hu J, Zhou Q, Liu HJ, Wu HY, Xu J, Ni PX, Zeng DL, Liu DH, Tian P, Gong LH, Ye C, Zhang GH, Wang J, Tian FK, Xue DW, Liao Y, Zhu L, Chen MS, Li JY, Cheng SH, Zhang GY, Wang J, Qian Q. Gao ZY, et al. Proc Natl Acad Sci U S A. 2013 Aug 27;110(35):14492-7. doi: 10.1073/pnas.1306579110. Epub 2013 Aug 12. Proc Natl Acad Sci U S A. 2013. PMID: 23940322 Free PMC article.
Molecular footprints of domestication and improvement in soybean revealed by whole genome re-sequencing.
Li YH, Zhao SC, Ma JX, Li D, Yan L, Li J, Qi XT, Guo XS, Zhang L, He WM, Chang RZ, Liang QS, Guo Y, Ye C, Wang XB, Tao Y, Guan RX, Wang JY, Liu YL, Jin LG, Zhang XQ, Liu ZX, Zhang LJ, Chen J, Wang KJ, Nielsen R, Li RQ, Chen PY, Li WB, Reif JC, Purugganan M, Wang J, Zhang MC, Wang J, Qiu LJ. Li YH, et al. BMC Genomics. 2013 Aug 28;14:579. doi: 10.1186/1471-2164-14-579. BMC Genomics. 2013. PMID: 23984715 Free PMC article.
The draft genome of Tibetan hulless barley reveals adaptive patterns to the high stressful Tibetan Plateau.
Zeng X, Long H, Wang Z, Zhao S, Tang Y, Huang Z, Wang Y, Xu Q, Mao L, Deng G, Yao X, Li X, Bai L, Yuan H, Pan Z, Liu R, Chen X, WangMu Q, Chen M, Yu L, Liang J, DunZhu D, Zheng Y, Yu S, LuoBu Z, Guang X, Li J, Deng C, Hu W, Chen C, TaBa X, Gao L, Lv X, Abu YB, Fang X, Nevo E, Yu M, Wang J, Tashi N. Zeng X, et al. Among authors: zhao s. Proc Natl Acad Sci U S A. 2015 Jan 27;112(4):1095-100. doi: 10.1073/pnas.1423628112. Epub 2015 Jan 12. Proc Natl Acad Sci U S A. 2015. PMID: 25583503 Free PMC article.
The draft genome of blunt snout bream (Megalobrama amblycephala) reveals the development of intermuscular bone and adaptation to herbivorous diet.
Liu H, Chen C, Gao Z, Min J, Gu Y, Jian J, Jiang X, Cai H, Ebersberger I, Xu M, Zhang X, Chen J, Luo W, Chen B, Chen J, Liu H, Li J, Lai R, Bai M, Wei J, Yi S, Wang H, Cao X, Zhou X, Zhao Y, Wei K, Yang R, Liu B, Zhao S, Fang X, Schartl M, Qian X, Wang W. Liu H, et al. Among authors: zhao y, zhao s. Gigascience. 2017 Jul 1;6(7):1-13. doi: 10.1093/gigascience/gix039. Gigascience. 2017. PMID: 28535200 Free PMC article.
Draft genome sequence of Camellia sinensis var. sinensis provides insights into the evolution of the tea genome and tea quality.
Wei C, Yang H, Wang S, Zhao J, Liu C, Gao L, Xia E, Lu Y, Tai Y, She G, Sun J, Cao H, Tong W, Gao Q, Li Y, Deng W, Jiang X, Wang W, Chen Q, Zhang S, Li H, Wu J, Wang P, Li P, Shi C, Zheng F, Jian J, Huang B, Shan D, Shi M, Fang C, Yue Y, Li F, Li D, Wei S, Han B, Jiang C, Yin Y, Xia T, Zhang Z, Bennetzen JL, Zhao S, Wan X. Wei C, et al. Among authors: zhao j, zhao s. Proc Natl Acad Sci U S A. 2018 May 1;115(18):E4151-E4158. doi: 10.1073/pnas.1719622115. Epub 2018 Apr 20. Proc Natl Acad Sci U S A. 2018. PMID: 29678829 Free PMC article.
Origin and evolution of qingke barley in Tibet.
Zeng X, Guo Y, Xu Q, Mascher M, Guo G, Li S, Mao L, Liu Q, Xia Z, Zhou J, Yuan H, Tai S, Wang Y, Wei Z, Song L, Zha S, Li S, Tang Y, Bai L, Zhuang Z, He W, Zhao S, Fang X, Gao Q, Yin Y, Wang J, Yang H, Zhang J, Henry RJ, Stein N, Tashi N. Zeng X, et al. Among authors: zhao s. Nat Commun. 2018 Dec 21;9(1):5433. doi: 10.1038/s41467-018-07920-5. Nat Commun. 2018. PMID: 30575759 Free PMC article.
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