Marcotte EM - Search Results

1

Protein-to-mRNA ratios are conserved between Pseudomonas aeruginosa strains.

Kwon T, Huse HK, Vogel C, Whiteley M, Marcotte EM. Kwon T, et al. Among authors: marcotte em. J Proteome Res. 2014 May 2;13(5):2370-80. doi: 10.1021/pr4011684. Epub 2014 Apr 17. J Proteome Res. 2014. PMID: 24742327 Free PMC article.

2

Mass spectrometry of the M. smegmatis proteome: protein expression levels correlate with function, operons, and codon bias.

Wang R, Prince JT, Marcotte EM. Wang R, et al. Among authors: marcotte em. Genome Res. 2005 Aug;15(8):1118-26. doi: 10.1101/gr.3994105. Genome Res. 2005. PMID: 16077011 Free PMC article.

3

Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation.

Lu P, Vogel C, Wang R, Yao X, Marcotte EM. Lu P, et al. Among authors: marcotte em. Nat Biotechnol. 2007 Jan;25(1):117-24. doi: 10.1038/nbt1270. Epub 2006 Dec 24. Nat Biotechnol. 2007. PMID: 17187058

4

An improved, bias-reduced probabilistic functional gene network of baker's yeast, Saccharomyces cerevisiae.

Lee I, Li Z, Marcotte EM. Lee I, et al. Among authors: marcotte em. PLoS One. 2007 Oct 3;2(10):e988. doi: 10.1371/journal.pone.0000988. PLoS One. 2007. PMID: 17912365 Free PMC article.

5

The proteomic response of Mycobacterium smegmatis to anti-tuberculosis drugs suggests targeted pathways.

Wang R, Marcotte EM. Wang R, et al. Among authors: marcotte em. J Proteome Res. 2008 Mar;7(3):855-65. doi: 10.1021/pr0703066. Epub 2008 Feb 15. J Proteome Res. 2008. PMID: 18275136

6

A map of human protein interactions derived from co-expression of human mRNAs and their orthologs.

Ramani AK, Li Z, Hart GT, Carlson MW, Boutz DR, Marcotte EM. Ramani AK, et al. Among authors: marcotte em. Mol Syst Biol. 2008;4:180. doi: 10.1038/msb.2008.19. Epub 2008 Apr 15. Mol Syst Biol. 2008. PMID: 18414481 Free PMC article.

7

Calculating absolute and relative protein abundance from mass spectrometry-based protein expression data.

Vogel C, Marcotte EM. Vogel C, et al. Among authors: marcotte em. Nat Protoc. 2008;3(9):1444-51. doi: 10.1038/nport.2008.132. Nat Protoc. 2008. PMID: 18772871

8

Systematic definition of protein constituents along the major polarization axis reveals an adaptive reuse of the polarization machinery in pheromone-treated budding yeast.

Narayanaswamy R, Moradi EK, Niu W, Hart GT, Davis M, McGary KL, Ellington AD, Marcotte EM. Narayanaswamy R, et al. Among authors: marcotte em. J Proteome Res. 2009 Jan;8(1):6-19. doi: 10.1021/pr800524g. J Proteome Res. 2009. PMID: 19053807 Free PMC article.

9

The APEX Quantitative Proteomics Tool: generating protein quantitation estimates from LC-MS/MS proteomics results.

Braisted JC, Kuntumalla S, Vogel C, Marcotte EM, Rodrigues AR, Wang R, Huang ST, Ferlanti ES, Saeed AI, Fleischmann RD, Peterson SN, Pieper R. Braisted JC, et al. Among authors: marcotte em. BMC Bioinformatics. 2008 Dec 9;9:529. doi: 10.1186/1471-2105-9-529. BMC Bioinformatics. 2008. PMID: 19068132 Free PMC article.

10

Buffering by gene duplicates: an analysis of molecular correlates and evolutionary conservation.

Hannay K, Marcotte EM, Vogel C. Hannay K, et al. Among authors: marcotte em. BMC Genomics. 2008 Dec 16;9:609. doi: 10.1186/1471-2164-9-609. BMC Genomics. 2008. PMID: 19087332 Free PMC article.

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