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Page 1
Tissue-specific SMARCA4 binding at active and repressed regulatory elements during embryogenesis.
Attanasio C, Nord AS, Zhu Y, Blow MJ, Biddie SC, Mendenhall EM, Dixon J, Wright C, Hosseini R, Akiyama JA, Holt A, Plajzer-Frick I, Shoukry M, Afzal V, Ren B, Bernstein BE, Rubin EM, Visel A, Pennacchio LA. Attanasio C, et al. Among authors: akiyama ja. Genome Res. 2014 Jun;24(6):920-9. doi: 10.1101/gr.168930.113. Epub 2014 Apr 21. Genome Res. 2014. PMID: 24752179 Free PMC article.
In vivo enhancer analysis of human conserved non-coding sequences.
Pennacchio LA, Ahituv N, Moses AM, Prabhakar S, Nobrega MA, Shoukry M, Minovitsky S, Dubchak I, Holt A, Lewis KD, Plajzer-Frick I, Akiyama J, De Val S, Afzal V, Black BL, Couronne O, Eisen MB, Visel A, Rubin EM. Pennacchio LA, et al. Nature. 2006 Nov 23;444(7118):499-502. doi: 10.1038/nature05295. Epub 2006 Nov 5. Nature. 2006. PMID: 17086198 Free article.
In vivo characterization of human APOA5 haplotypes.
Ahituv N, Akiyama J, Chapman-Helleboid A, Fruchart J, Pennacchio LA. Ahituv N, et al. Genomics. 2007 Dec;90(6):674-9. doi: 10.1016/j.ygeno.2007.08.003. Epub 2007 Oct 23. Genomics. 2007. PMID: 17936576 Free article.
Human-specific gain of function in a developmental enhancer.
Prabhakar S, Visel A, Akiyama JA, Shoukry M, Lewis KD, Holt A, Plajzer-Frick I, Morrison H, Fitzpatrick DR, Afzal V, Pennacchio LA, Rubin EM, Noonan JP. Prabhakar S, et al. Among authors: akiyama ja. Science. 2008 Sep 5;321(5894):1346-50. doi: 10.1126/science.1159974. Science. 2008. PMID: 18772437 Free PMC article.
ChIP-seq accurately predicts tissue-specific activity of enhancers.
Visel A, Blow MJ, Li Z, Zhang T, Akiyama JA, Holt A, Plajzer-Frick I, Shoukry M, Wright C, Chen F, Afzal V, Ren B, Rubin EM, Pennacchio LA. Visel A, et al. Among authors: akiyama ja. Nature. 2009 Feb 12;457(7231):854-8. doi: 10.1038/nature07730. Nature. 2009. PMID: 19212405 Free PMC article.
Functional autonomy of distant-acting human enhancers.
Visel A, Akiyama JA, Shoukry M, Afzal V, Rubin EM, Pennacchio LA. Visel A, et al. Among authors: akiyama ja. Genomics. 2009 Jun;93(6):509-13. doi: 10.1016/j.ygeno.2009.02.002. Epub 2009 Mar 5. Genomics. 2009. PMID: 19268701 Free PMC article.
ChIP-Seq identification of weakly conserved heart enhancers.
Blow MJ, McCulley DJ, Li Z, Zhang T, Akiyama JA, Holt A, Plajzer-Frick I, Shoukry M, Wright C, Chen F, Afzal V, Bristow J, Ren B, Black BL, Rubin EM, Visel A, Pennacchio LA. Blow MJ, et al. Among authors: akiyama ja. Nat Genet. 2010 Sep;42(9):806-10. doi: 10.1038/ng.650. Epub 2010 Aug 22. Nat Genet. 2010. PMID: 20729851 Free PMC article.
Large-scale discovery of enhancers from human heart tissue.
May D, Blow MJ, Kaplan T, McCulley DJ, Jensen BC, Akiyama JA, Holt A, Plajzer-Frick I, Shoukry M, Wright C, Afzal V, Simpson PC, Rubin EM, Black BL, Bristow J, Pennacchio LA, Visel A. May D, et al. Among authors: akiyama ja. Nat Genet. 2011 Dec 4;44(1):89-93. doi: 10.1038/ng.1006. Nat Genet. 2011. PMID: 22138689 Free PMC article.
62 results