Pe'er D - Search Results

1

Single-cell trajectory detection uncovers progression and regulatory coordination in human B cell development.

Bendall SC, Davis KL, Amir el-AD, Tadmor MD, Simonds EF, Chen TJ, Shenfeld DK, Nolan GP, Pe'er D. Bendall SC, et al. Cell. 2014 Apr 24;157(3):714-25. doi: 10.1016/j.cell.2014.04.005. Cell. 2014. PMID: 24766814 Free PMC article.

2

Causal protein-signaling networks derived from multiparameter single-cell data.

Sachs K, Perez O, Pe'er D, Lauffenburger DA, Nolan GP. Sachs K, et al. Science. 2005 Apr 22;308(5721):523-9. doi: 10.1126/science.1105809. Science. 2005. PMID: 15845847

3

Learning signaling network structures with sparsely distributed data.

Sachs K, Itani S, Carlisle J, Nolan GP, Pe'er D, Lauffenburger DA. Sachs K, et al. J Comput Biol. 2009 Feb;16(2):201-12. doi: 10.1089/cmb.2008.07TT. J Comput Biol. 2009. PMID: 19193145 Free PMC article.

4

An integrated approach to uncover drivers of cancer.

Akavia UD, Litvin O, Kim J, Sanchez-Garcia F, Kotliar D, Causton HC, Pochanard P, Mozes E, Garraway LA, Pe'er D. Akavia UD, et al. Cell. 2010 Dec 10;143(6):1005-17. doi: 10.1016/j.cell.2010.11.013. Epub 2010 Dec 2. Cell. 2010. PMID: 21129771 Free PMC article.

5

Principles and strategies for developing network models in cancer.

Pe'er D, Hacohen N. Pe'er D, et al. Cell. 2011 Mar 18;144(6):864-73. doi: 10.1016/j.cell.2011.03.001. Cell. 2011. PMID: 21414479 Free PMC article.

6

Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum.

Bendall SC, Simonds EF, Qiu P, Amir el-AD, Krutzik PO, Finck R, Bruggner RV, Melamed R, Trejo A, Ornatsky OI, Balderas RS, Plevritis SK, Sachs K, Pe'er D, Tanner SD, Nolan GP. Bendall SC, et al. Science. 2011 May 6;332(6030):687-96. doi: 10.1126/science.1198704. Science. 2011. PMID: 21551058 Free PMC article.

7

Normalization of mass cytometry data with bead standards.

Finck R, Simonds EF, Jager A, Krishnaswamy S, Sachs K, Fantl W, Pe'er D, Nolan GP, Bendall SC. Finck R, et al. Cytometry A. 2013 May;83(5):483-94. doi: 10.1002/cyto.a.22271. Epub 2013 Mar 19. Cytometry A. 2013. PMID: 23512433 Free PMC article.

8

viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia.

Amir el-AD, Davis KL, Tadmor MD, Simonds EF, Levine JH, Bendall SC, Shenfeld DK, Krishnaswamy S, Nolan GP, Pe'er D. Amir el-AD, et al. Nat Biotechnol. 2013 Jun;31(6):545-52. doi: 10.1038/nbt.2594. Epub 2013 May 19. Nat Biotechnol. 2013. PMID: 23685480 Free PMC article.

9

Systems biology. Conditional density-based analysis of T cell signaling in single-cell data.

Krishnaswamy S, Spitzer MH, Mingueneau M, Bendall SC, Litvin O, Stone E, Pe'er D, Nolan GP. Krishnaswamy S, et al. Science. 2014 Nov 28;346(6213):1250689. doi: 10.1126/science.1250689. Epub 2014 Oct 23. Science. 2014. PMID: 25342659 Free PMC article.

10

Single-cell mass cytometry of TCR signaling: amplification of small initial differences results in low ERK activation in NOD mice.

Mingueneau M, Krishnaswamy S, Spitzer MH, Bendall SC, Stone EL, Hedrick SM, Pe'er D, Mathis D, Nolan GP, Benoist C. Mingueneau M, et al. Proc Natl Acad Sci U S A. 2014 Nov 18;111(46):16466-71. doi: 10.1073/pnas.1419337111. Epub 2014 Oct 31. Proc Natl Acad Sci U S A. 2014. PMID: 25362052 Free PMC article.

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