Berger B - Search Results

1

Improving the power of GWAS and avoiding confounding from population stratification with PC-Select.

Tucker G, Price AL, Berger B. Tucker G, et al. Among authors: berger b. Genetics. 2014 Jul;197(3):1045-9. doi: 10.1534/genetics.114.164285. Epub 2014 Apr 29. Genetics. 2014. PMID: 24788602 Free PMC article.

2

Building quantitative prediction models for tissue residue of two explosives compounds in earthworms from microarray gene expression data.

Gong P, Loh PR, Barker ND, Tucker G, Wang N, Zhang C, Escalon BL, Berger B, Perkins EJ. Gong P, et al. Among authors: berger b. Environ Sci Technol. 2012 Jan 3;46(1):19-26. doi: 10.1021/es201187u. Epub 2011 Aug 8. Environ Sci Technol. 2012. PMID: 21776976

3

Proteomic and functional genomic landscape of receptor tyrosine kinase and ras to extracellular signal-regulated kinase signaling.

Friedman AA, Tucker G, Singh R, Yan D, Vinayagam A, Hu Y, Binari R, Hong P, Sun X, Porto M, Pacifico S, Murali T, Finley RL Jr, Asara JM, Berger B, Perrimon N. Friedman AA, et al. Among authors: berger b. Sci Signal. 2011 Oct 25;4(196):rs10. doi: 10.1126/scisignal.2002029. Sci Signal. 2011. PMID: 22028469 Free PMC article.

4

Phenotype prediction using regularized regression on genetic data in the DREAM5 Systems Genetics B Challenge.

Loh PR, Tucker G, Berger B. Loh PR, et al. Among authors: berger b. PLoS One. 2011;6(12):e29095. doi: 10.1371/journal.pone.0029095. Epub 2011 Dec 28. PLoS One. 2011. PMID: 22216175 Free PMC article.

5

Inferring admixture histories of human populations using linkage disequilibrium.

Loh PR, Lipson M, Patterson N, Moorjani P, Pickrell JK, Reich D, Berger B. Loh PR, et al. Among authors: berger b. Genetics. 2013 Apr;193(4):1233-54. doi: 10.1534/genetics.112.147330. Epub 2013 Feb 14. Genetics. 2013. PMID: 23410830 Free PMC article.

6

Efficient moment-based inference of admixture parameters and sources of gene flow.

Lipson M, Loh PR, Levin A, Reich D, Patterson N, Berger B. Lipson M, et al. Among authors: berger b. Mol Biol Evol. 2013 Aug;30(8):1788-802. doi: 10.1093/molbev/mst099. Epub 2013 May 24. Mol Biol Evol. 2013. PMID: 23709261 Free PMC article.

7

Genetic evidence for recent population mixture in India.

Moorjani P, Thangaraj K, Patterson N, Lipson M, Loh PR, Govindaraj P, Berger B, Reich D, Singh L. Moorjani P, et al. Among authors: berger b. Am J Hum Genet. 2013 Sep 5;93(3):422-38. doi: 10.1016/j.ajhg.2013.07.006. Epub 2013 Aug 8. Am J Hum Genet. 2013. PMID: 23932107 Free PMC article.

8

A sampling framework for incorporating quantitative mass spectrometry data in protein interaction analysis.

Tucker G, Loh PR, Berger B. Tucker G, et al. Among authors: berger b. BMC Bioinformatics. 2013 Oct 4;14:299. doi: 10.1186/1471-2105-14-299. BMC Bioinformatics. 2013. PMID: 24093595 Free PMC article.

9

Network topology and parameter estimation: from experimental design methods to gene regulatory network kinetics using a community based approach.

Meyer P, Cokelaer T, Chandran D, Kim KH, Loh PR, Tucker G, Lipson M, Berger B, Kreutz C, Raue A, Steiert B, Timmer J, Bilal E, Sauro HM, Stolovitzky G, Saez-Rodriguez J. Meyer P, et al. Among authors: berger b. BMC Syst Biol. 2014 Feb 7;8:13. doi: 10.1186/1752-0509-8-13. BMC Syst Biol. 2014. PMID: 24507381 Free PMC article.

10

A quantitative chaperone interaction network reveals the architecture of cellular protein homeostasis pathways.

Taipale M, Tucker G, Peng J, Krykbaeva I, Lin ZY, Larsen B, Choi H, Berger B, Gingras AC, Lindquist S. Taipale M, et al. Among authors: berger b. Cell. 2014 Jul 17;158(2):434-448. doi: 10.1016/j.cell.2014.05.039. Cell. 2014. PMID: 25036637 Free PMC article.

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