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A new approach to bias correction in RNA-Seq.
Jones DC, Ruzzo WL, Peng X, Katze MG. Jones DC, et al. Among authors: ruzzo wl. Bioinformatics. 2012 Apr 1;28(7):921-8. doi: 10.1093/bioinformatics/bts055. Epub 2012 Jan 28. Bioinformatics. 2012. PMID: 22285831 Free PMC article.
Polee: RNA-Seq analysis using approximate likelihood.
Jones DC, Ruzzo WL. Jones DC, et al. Among authors: ruzzo wl. NAR Genom Bioinform. 2021 May 25;3(2):lqab046. doi: 10.1093/nargab/lqab046. eCollection 2021 Jun. NAR Genom Bioinform. 2021. PMID: 34056596 Free PMC article.
Let-7 family of microRNA is required for maturation and adult-like metabolism in stem cell-derived cardiomyocytes.
Kuppusamy KT, Jones DC, Sperber H, Madan A, Fischer KA, Rodriguez ML, Pabon L, Zhu WZ, Tulloch NL, Yang X, Sniadecki NJ, Laflamme MA, Ruzzo WL, Murry CE, Ruohola-Baker H. Kuppusamy KT, et al. Among authors: ruzzo wl. Proc Natl Acad Sci U S A. 2015 May 26;112(21):E2785-94. doi: 10.1073/pnas.1424042112. Epub 2015 May 11. Proc Natl Acad Sci U S A. 2015. PMID: 25964336 Free PMC article.
Metabolic Control over mTOR-Dependent Diapause-like State.
Hussein AM, Wang Y, Mathieu J, Margaretha L, Song C, Jones DC, Cavanaugh C, Miklas JW, Mahen E, Showalter MR, Ruzzo WL, Fiehn O, Ware CB, Blau CA, Ruohola-Baker H. Hussein AM, et al. Among authors: ruzzo wl. Dev Cell. 2020 Jan 27;52(2):236-250.e7. doi: 10.1016/j.devcel.2019.12.018. Dev Cell. 2020. PMID: 31991105 Free PMC article.
Finding non-coding RNAs through genome-scale clustering.
Tseng HH, Weinberg Z, Gore J, Breaker RR, Ruzzo WL. Tseng HH, et al. Among authors: ruzzo wl. J Bioinform Comput Biol. 2009 Apr;7(2):373-88. doi: 10.1142/s0219720009004126. J Bioinform Comput Biol. 2009. PMID: 19340921 Free PMC article.
52 results