Reid G - Search Results

1

Inference of RNA polymerase II transcription dynamics from chromatin immunoprecipitation time course data.

wa Maina C, Honkela A, Matarese F, Grote K, Stunnenberg HG, Reid G, Lawrence ND, Rattray M. wa Maina C, et al. Among authors: reid g. PLoS Comput Biol. 2014 May 15;10(5):e1003598. doi: 10.1371/journal.pcbi.1003598. eCollection 2014 May. PLoS Comput Biol. 2014. PMID: 24830797 Free PMC article.

2

Genome-wide modeling of transcription kinetics reveals patterns of RNA production delays.

Honkela A, Peltonen J, Topa H, Charapitsa I, Matarese F, Grote K, Stunnenberg HG, Reid G, Lawrence ND, Rattray M. Honkela A, et al. Among authors: reid g. Proc Natl Acad Sci U S A. 2015 Oct 20;112(42):13115-20. doi: 10.1073/pnas.1420404112. Epub 2015 Oct 5. Proc Natl Acad Sci U S A. 2015. PMID: 26438844 Free PMC article.

3

Integrative analysis of deep sequencing data identifies estrogen receptor early response genes and links ATAD3B to poor survival in breast cancer.

Ovaska K, Matarese F, Grote K, Charapitsa I, Cervera A, Liu C, Reid G, Seifert M, Stunnenberg HG, Hautaniemi S. Ovaska K, et al. Among authors: reid g. PLoS Comput Biol. 2013;9(6):e1003100. doi: 10.1371/journal.pcbi.1003100. Epub 2013 Jun 20. PLoS Comput Biol. 2013. PMID: 23818839 Free PMC article.

4

Predicting stimulation-dependent enhancer-promoter interactions from ChIP-Seq time course data.

Dzida T, Iqbal M, Charapitsa I, Reid G, Stunnenberg H, Matarese F, Grote K, Honkela A, Rattray M. Dzida T, et al. Among authors: reid g. PeerJ. 2017 Sep 28;5:e3742. doi: 10.7717/peerj.3742. eCollection 2017. PeerJ. 2017. PMID: 28970965 Free PMC article.

5

Marking time: the dynamic role of chromatin and covalent modification in transcription.

Reid G, Gallais R, Métivier R. Reid G, et al. Int J Biochem Cell Biol. 2009 Jan;41(1):155-63. doi: 10.1016/j.biocel.2008.08.028. Epub 2008 Sep 2. Int J Biochem Cell Biol. 2009. PMID: 18805503 Review.

6

Estrogen-dependent control and cell-to-cell variability of transcriptional bursting.

Fritzsch C, Baumgärtner S, Kuban M, Steinshorn D, Reid G, Legewie S. Fritzsch C, et al. Among authors: reid g. Mol Syst Biol. 2018 Feb 23;14(2):e7678. doi: 10.15252/msb.20177678. Mol Syst Biol. 2018. PMID: 29476006 Free PMC article.

7

Transcriptome profiling of estrogen-regulated genes in human primary osteoblasts reveals an osteoblast-specific regulation of the insulin-like growth factor binding protein 4 gene.

Denger S, Bähr-Ivacevic T, Brand H, Reid G, Blake J, Seifert M, Lin CY, May K, Benes V, Liu ET, Gannon F. Denger S, et al. Among authors: reid g. Mol Endocrinol. 2008 Feb;22(2):361-79. doi: 10.1210/me.2007-0292. Epub 2007 Oct 25. Mol Endocrinol. 2008. PMID: 17962383 Free PMC article.

8

Transient cyclical methylation of promoter DNA.

Kangaspeska S, Stride B, Métivier R, Polycarpou-Schwarz M, Ibberson D, Carmouche RP, Benes V, Gannon F, Reid G. Kangaspeska S, et al. Among authors: reid g. Nature. 2008 Mar 6;452(7183):112-5. doi: 10.1038/nature06640. Nature. 2008. PMID: 18322535

9

Cyclic, proteasome-mediated turnover of unliganded and liganded ERalpha on responsive promoters is an integral feature of estrogen signaling.

Reid G, Hübner MR, Métivier R, Brand H, Denger S, Manu D, Beaudouin J, Ellenberg J, Gannon F. Reid G, et al. Mol Cell. 2003 Mar;11(3):695-707. doi: 10.1016/s1097-2765(03)00090-x. Mol Cell. 2003. PMID: 12667452 Free article.

10

E2-mediated cathepsin D (CTSD) activation involves looping of distal enhancer elements.

Bretschneider N, Kangaspeska S, Seifert M, Reid G, Gannon F, Denger S. Bretschneider N, et al. Among authors: reid g. Mol Oncol. 2008 Aug;2(2):182-90. doi: 10.1016/j.molonc.2008.05.004. Epub 2008 May 29. Mol Oncol. 2008. PMID: 19383337 Free PMC article.

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