Terrapon N - Search Results

1

Identification of divergent protein domains by combining HMM-HMM comparisons and co-occurrence detection.

Ghouila A, Florent I, Guerfali FZ, Terrapon N, Laouini D, Yahia SB, Gascuel O, Bréhélin L. Ghouila A, et al. Among authors: terrapon n. PLoS One. 2014 Jun 5;9(6):e95275. doi: 10.1371/journal.pone.0095275. eCollection 2014. PLoS One. 2014. PMID: 24901648 Free PMC article.

2

Detection of new protein domains using co-occurrence: application to Plasmodium falciparum.

Terrapon N, Gascuel O, Maréchal E, Bréehélin L. Terrapon N, et al. Bioinformatics. 2009 Dec 1;25(23):3077-83. doi: 10.1093/bioinformatics/btp560. Epub 2009 Sep 28. Bioinformatics. 2009. PMID: 19786484

3

EuPathDomains: the divergent domain database for eukaryotic pathogens.

Ghouila A, Terrapon N, Gascuel O, Guerfali FZ, Laouini D, Maréchal E, Bréhélin L. Ghouila A, et al. Among authors: terrapon n. Infect Genet Evol. 2011 Jun;11(4):698-707. doi: 10.1016/j.meegid.2010.09.008. Epub 2010 Nov 4. Infect Genet Evol. 2011. PMID: 20920608

4

Fitting hidden Markov models of protein domains to a target species: application to Plasmodium falciparum.

Terrapon N, Gascuel O, Maréchal E, Bréhélin L. Terrapon N, et al. BMC Bioinformatics. 2012 May 1;13:67. doi: 10.1186/1471-2105-13-67. BMC Bioinformatics. 2012. PMID: 22548871 Free PMC article.

5

Automatic prediction of polysaccharide utilization loci in Bacteroidetes species.

Terrapon N, Lombard V, Gilbert HJ, Henrissat B. Terrapon N, et al. Bioinformatics. 2015 Mar 1;31(5):647-55. doi: 10.1093/bioinformatics/btu716. Epub 2014 Oct 28. Bioinformatics. 2015. PMID: 25355788

6

Bioinformatic Analysis of Lytic Polysaccharide Monooxygenases Reveals the Pan-Families Occurrence of Intrinsically Disordered C-Terminal Extensions.

Tamburrini KC, Terrapon N, Lombard V, Bissaro B, Longhi S, Berrin JG. Tamburrini KC, et al. Among authors: terrapon n. Biomolecules. 2021 Nov 4;11(11):1632. doi: 10.3390/biom11111632. Biomolecules. 2021. PMID: 34827630 Free PMC article.

7

PULDB: the expanded database of Polysaccharide Utilization Loci.

Terrapon N, Lombard V, Drula É, Lapébie P, Al-Masaudi S, Gilbert HJ, Henrissat B. Terrapon N, et al. Nucleic Acids Res. 2018 Jan 4;46(D1):D677-D683. doi: 10.1093/nar/gkx1022. Nucleic Acids Res. 2018. PMID: 29088389 Free PMC article.

8

Comparative genomic analyses reveal diverse virulence factors and antimicrobial resistance mechanisms in clinical Elizabethkingia meningoseptica strains.

Chen S, Soehnlen M, Blom J, Terrapon N, Henrissat B, Walker ED. Chen S, et al. Among authors: terrapon n. PLoS One. 2019 Oct 10;14(10):e0222648. doi: 10.1371/journal.pone.0222648. eCollection 2019. PLoS One. 2019. PMID: 31600234 Free PMC article.

9

A bioinformatics analysis of 3400 lytic polysaccharide oxidases from family AA9.

Lenfant N, Hainaut M, Terrapon N, Drula E, Lombard V, Henrissat B. Lenfant N, et al. Among authors: terrapon n. Carbohydr Res. 2017 Aug 7;448:166-174. doi: 10.1016/j.carres.2017.04.012. Epub 2017 Apr 13. Carbohydr Res. 2017. PMID: 28434716

10

Rapid similarity search of proteins using alignments of domain arrangements.

Terrapon N, Weiner J, Grath S, Moore AD, Bornberg-Bauer E. Terrapon N, et al. Bioinformatics. 2014 Jan 15;30(2):274-81. doi: 10.1093/bioinformatics/btt379. Epub 2013 Jul 4. Bioinformatics. 2014. PMID: 23828785

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