Berry D - Search Results

1

Type I interferons have opposing effects during the emergence and recovery phases of colitis.

Rauch I, Hainzl E, Rosebrock F, Heider S, Schwab C, Berry D, Stoiber D, Wagner M, Schleper C, Loy A, Urich T, Müller M, Strobl B, Kenner L, Decker T. Rauch I, et al. Among authors: berry d. Eur J Immunol. 2014 Sep;44(9):2749-60. doi: 10.1002/eji.201344401. Epub 2014 Aug 25. Eur J Immunol. 2014. PMID: 24975266 Free article.

2

Systematic spatial bias in DNA microarray hybridization is caused by probe spot position-dependent variability in lateral diffusion.

Steger D, Berry D, Haider S, Horn M, Wagner M, Stocker R, Loy A. Steger D, et al. Among authors: berry d. PLoS One. 2011;6(8):e23727. doi: 10.1371/journal.pone.0023727. Epub 2011 Aug 17. PLoS One. 2011. PMID: 21858215 Free PMC article.

3

Barcoded primers used in multiplex amplicon pyrosequencing bias amplification.

Berry D, Ben Mahfoudh K, Wagner M, Loy A. Berry D, et al. Appl Environ Microbiol. 2011 Nov;77(21):7846-9. doi: 10.1128/AEM.05220-11. Epub 2011 Sep 2. Appl Environ Microbiol. 2011. PMID: 21890669 Free PMC article.

4

Phylotype-level 16S rRNA analysis reveals new bacterial indicators of health state in acute murine colitis.

Berry D, Schwab C, Milinovich G, Reichert J, Ben Mahfoudh K, Decker T, Engel M, Hai B, Hainzl E, Heider S, Kenner L, Müller M, Rauch I, Strobl B, Wagner M, Schleper C, Urich T, Loy A. Berry D, et al. ISME J. 2012 Nov;6(11):2091-106. doi: 10.1038/ismej.2012.39. Epub 2012 May 10. ISME J. 2012. PMID: 22572638 Free PMC article.

5

Host-compound foraging by intestinal microbiota revealed by single-cell stable isotope probing.

Berry D, Stecher B, Schintlmeister A, Reichert J, Brugiroux S, Wild B, Wanek W, Richter A, Rauch I, Decker T, Loy A, Wagner M. Berry D, et al. Proc Natl Acad Sci U S A. 2013 Mar 19;110(12):4720-5. doi: 10.1073/pnas.1219247110. Epub 2013 Mar 4. Proc Natl Acad Sci U S A. 2013. PMID: 23487774 Free PMC article.

6

Colonization resistance and microbial ecophysiology: using gnotobiotic mouse models and single-cell technology to explore the intestinal jungle.

Stecher B, Berry D, Loy A. Stecher B, et al. Among authors: berry d. FEMS Microbiol Rev. 2013 Sep;37(5):793-829. doi: 10.1111/1574-6976.12024. Epub 2013 Jun 5. FEMS Microbiol Rev. 2013. PMID: 23662775 Free article. Review.

7

Temporal bacterial community dynamics vary among ulcerative colitis patients after fecal microbiota transplantation.

Angelberger S, Reinisch W, Makristathis A, Lichtenberger C, Dejaco C, Papay P, Novacek G, Trauner M, Loy A, Berry D. Angelberger S, et al. Among authors: berry d. Am J Gastroenterol. 2013 Oct;108(10):1620-30. doi: 10.1038/ajg.2013.257. Epub 2013 Sep 24. Am J Gastroenterol. 2013. PMID: 24060759

8

NxrB encoding the beta subunit of nitrite oxidoreductase as functional and phylogenetic marker for nitrite-oxidizing Nitrospira.

Pester M, Maixner F, Berry D, Rattei T, Koch H, Lücker S, Nowka B, Richter A, Spieck E, Lebedeva E, Loy A, Wagner M, Daims H. Pester M, et al. Among authors: berry d. Environ Microbiol. 2014 Oct;16(10):3055-71. doi: 10.1111/1462-2920.12300. Epub 2013 Nov 8. Environ Microbiol. 2014. PMID: 24118804

9

Endospores of thermophilic bacteria as tracers of microbial dispersal by ocean currents.

Müller AL, de Rezende JR, Hubert CR, Kjeldsen KU, Lagkouvardos I, Berry D, Jørgensen BB, Loy A. Müller AL, et al. Among authors: berry d. ISME J. 2014 Jun;8(6):1153-65. doi: 10.1038/ismej.2013.225. Epub 2013 Dec 19. ISME J. 2014. PMID: 24351936 Free PMC article.

10

Longitudinal study of murine microbiota activity and interactions with the host during acute inflammation and recovery.

Schwab C, Berry D, Rauch I, Rennisch I, Ramesmayer J, Hainzl E, Heider S, Decker T, Kenner L, Müller M, Strobl B, Wagner M, Schleper C, Loy A, Urich T. Schwab C, et al. Among authors: berry d. ISME J. 2014 May;8(5):1101-14. doi: 10.1038/ismej.2013.223. Epub 2014 Jan 9. ISME J. 2014. PMID: 24401855 Free PMC article.

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