Nakayama S - Search Results

1

Diminazene or berenil, a classic duplex minor groove binder, binds to G-quadruplexes with low nanomolar dissociation constants and the amidine groups are also critical for G-quadruplex binding.

Zhou J, Le V, Kalia D, Nakayama S, Mikek C, Lewis EA, Sintim HO. Zhou J, et al. Among authors: nakayama s. Mol Biosyst. 2014 Oct;10(10):2724-34. doi: 10.1039/c4mb00359d. Mol Biosyst. 2014. PMID: 25096593

2

Biomolecule detection with peroxidase-mimicking DNAzymes; expanding detection modality with fluorogenic compounds.

Nakayama S, Sintim HO. Nakayama S, et al. Mol Biosyst. 2010 Jan;6(1):95-7. doi: 10.1039/b916228c. Epub 2009 Sep 25. Mol Biosyst. 2010. PMID: 20024070

3

A C-di-GMP-proflavine-hemin supramolecular complex has peroxidase activity--implication for a simple colorimetric detection.

Nakayama S, Roelofs K, Lee VT, Sintim HO. Nakayama S, et al. Mol Biosyst. 2012 Mar;8(3):726-9. doi: 10.1039/c2mb05430b. Epub 2012 Jan 18. Mol Biosyst. 2012. PMID: 22252690

4

Isothermal amplified detection of DNA and RNA.

Yan L, Zhou J, Zheng Y, Gamson AS, Roembke BT, Nakayama S, Sintim HO. Yan L, et al. Among authors: nakayama s. Mol Biosyst. 2014 May;10(5):970-1003. doi: 10.1039/c3mb70304e. Mol Biosyst. 2014. PMID: 24643211 Review.

5

Junction probes - sequence specific detection of nucleic acids via template enhanced hybridization processes.

Nakayama S, Yan L, Sintim HO. Nakayama S, et al. J Am Chem Soc. 2008 Sep 24;130(38):12560-1. doi: 10.1021/ja803146f. Epub 2008 Aug 29. J Am Chem Soc. 2008. PMID: 18759403

6

Colorimetric split G-quadruplex probes for nucleic acid sensing: improving reconstituted DNAzyme's catalytic efficiency via probe remodeling.

Nakayama S, Sintim HO. Nakayama S, et al. J Am Chem Soc. 2009 Jul 29;131(29):10320-33. doi: 10.1021/ja902951b. J Am Chem Soc. 2009. PMID: 19621970

7

Thiazole orange-induced c-di-GMP quadruplex formation facilitates a simple fluorescent detection of this ubiquitous biofilm regulating molecule.

Nakayama S, Kelsey I, Wang J, Roelofs K, Stefane B, Luo Y, Lee VT, Sintim HO. Nakayama S, et al. J Am Chem Soc. 2011 Apr 6;133(13):4856-64. doi: 10.1021/ja1091062. Epub 2011 Mar 8. J Am Chem Soc. 2011. PMID: 21384923

8

c-di-GMP can form remarkably stable G-quadruplexes at physiological conditions in the presence of some planar intercalators.

Nakayama S, Kelsey I, Wang J, Sintim HO. Nakayama S, et al. Chem Commun (Camb). 2011 Apr 28;47(16):4766-8. doi: 10.1039/c0cc05432a. Epub 2011 Mar 14. Chem Commun (Camb). 2011. PMID: 21399808

9

DNA-based peroxidation catalyst--what is the exact role of topology on catalysis and is there a special binding site for catalysis?

Nakayama S, Wang J, Sintim HO. Nakayama S, et al. Chemistry. 2011 May 9;17(20):5691-8. doi: 10.1002/chem.201002349. Epub 2011 Apr 5. Chemistry. 2011. PMID: 21469226

10

Conservative change to the phosphate moiety of cyclic diguanylic monophosphate remarkably affects its polymorphism and ability to bind DGC, PDE, and PilZ proteins.

Wang J, Zhou J, Donaldson GP, Nakayama S, Yan L, Lam YF, Lee VT, Sintim HO. Wang J, et al. Among authors: nakayama s. J Am Chem Soc. 2011 Jun 22;133(24):9320-30. doi: 10.1021/ja1112029. Epub 2011 May 25. J Am Chem Soc. 2011. PMID: 21612220

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