Ding F - Search Results

1

Structures of CRISPR Cas3 offer mechanistic insights into Cascade-activated DNA unwinding and degradation.

Huo Y, Nam KH, Ding F, Lee H, Wu L, Xiao Y, Farchione MD Jr, Zhou S, Rajashankar K, Kurinov I, Zhang R, Ke A. Huo Y, et al. Among authors: ding f. Nat Struct Mol Biol. 2014 Sep;21(9):771-7. doi: 10.1038/nsmb.2875. Epub 2014 Aug 17. Nat Struct Mol Biol. 2014. PMID: 25132177 Free PMC article.

2

Crystal structures of the SAM-III/S(MK) riboswitch reveal the SAM-dependent translation inhibition mechanism.

Lu C, Smith AM, Fuchs RT, Ding F, Rajashankar K, Henkin TM, Ke A. Lu C, et al. Among authors: ding f. Nat Struct Mol Biol. 2008 Oct;15(10):1076-83. doi: 10.1038/nsmb.1494. Epub 2008 Sep 21. Nat Struct Mol Biol. 2008. PMID: 18806797 Free PMC article.

3

A conformational switch controls hepatitis delta virus ribozyme catalysis.

Ke A, Zhou K, Ding F, Cate JH, Doudna JA. Ke A, et al. Among authors: ding f. Nature. 2004 May 13;429(6988):201-5. doi: 10.1038/nature02522. Nature. 2004. PMID: 15141216

4

Crystal structure of the S. solfataricus archaeal exosome reveals conformational flexibility in the RNA-binding ring.

Lu C, Ding F, Ke A. Lu C, et al. Among authors: ding f. PLoS One. 2010 Jan 15;5(1):e8739. doi: 10.1371/journal.pone.0008739. PLoS One. 2010. PMID: 20090900 Free PMC article.

5

SAM recognition and conformational switching mechanism in the Bacillus subtilis yitJ S box/SAM-I riboswitch.

Lu C, Ding F, Chowdhury A, Pradhan V, Tomsic J, Holmes WM, Henkin TM, Ke A. Lu C, et al. Among authors: ding f. J Mol Biol. 2010 Dec 17;404(5):803-18. doi: 10.1016/j.jmb.2010.09.059. Epub 2010 Oct 15. J Mol Biol. 2010. PMID: 20951706 Free PMC article.

6

Variable sequences outside the SAM-binding core critically influence the conformational dynamics of the SAM-III/SMK box riboswitch.

Lu C, Smith AM, Ding F, Chowdhury A, Henkin TM, Ke A. Lu C, et al. Among authors: ding f. J Mol Biol. 2011 Jun 24;409(5):786-99. doi: 10.1016/j.jmb.2011.04.039. Epub 2011 Apr 27. J Mol Biol. 2011. PMID: 21549712 Free PMC article.

7

Structure Basis for Directional R-loop Formation and Substrate Handover Mechanisms in Type I CRISPR-Cas System.

Xiao Y, Luo M, Hayes RP, Kim J, Ng S, Ding F, Liao M, Ke A. Xiao Y, et al. Among authors: ding f. Cell. 2017 Jun 29;170(1):48-60.e11. doi: 10.1016/j.cell.2017.06.012. Cell. 2017. PMID: 28666122 Free PMC article.

8

Structure and assembly of the essential RNA ring component of a viral DNA packaging motor.

Ding F, Lu C, Zhao W, Rajashankar KR, Anderson DL, Jardine PJ, Grimes S, Ke A. Ding F, et al. Proc Natl Acad Sci U S A. 2011 May 3;108(18):7357-62. doi: 10.1073/pnas.1016690108. Epub 2011 Apr 6. Proc Natl Acad Sci U S A. 2011. PMID: 21471452 Free PMC article.

9

Mn(2+)-sensing mechanisms of yybP-ykoY orphan riboswitches.

Price IR, Gaballa A, Ding F, Helmann JD, Ke A. Price IR, et al. Among authors: ding f. Mol Cell. 2015 Mar 19;57(6):1110-1123. doi: 10.1016/j.molcel.2015.02.016. Mol Cell. 2015. PMID: 25794619 Free PMC article.

10

Structural roles of monovalent cations in the HDV ribozyme.

Ke A, Ding F, Batchelor JD, Doudna JA. Ke A, et al. Among authors: ding f. Structure. 2007 Mar;15(3):281-7. doi: 10.1016/j.str.2007.01.017. Structure. 2007. PMID: 17355864 Free article.

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