Panahi A - Search Results

1

Transferring the PRIMO Coarse-Grained Force Field to the Membrane Environment: Simulations of Membrane Proteins and Helix-Helix Association.

Kar P, Gopal SM, Cheng YM, Panahi A, Feig M. Kar P, et al. Among authors: panahi a. J Chem Theory Comput. 2014 Aug 12;10(8):3459-3472. doi: 10.1021/ct500443v. Epub 2014 Jun 16. J Chem Theory Comput. 2014. PMID: 25136271 Free PMC article.

2

Dynamic Heterogeneous Dielectric Generalized Born (DHDGB): An implicit membrane model with a dynamically varying bilayer thickness.

Panahi A, Feig M. Panahi A, et al. J Chem Theory Comput. 2013 Mar 12;9(3):1709-1719. doi: 10.1021/ct300975k. J Chem Theory Comput. 2013. PMID: 23585740 Free PMC article.

3

Conformational sampling of influenza fusion peptide in membrane bilayers as a function of termini and protonation states.

Panahi A, Feig M. Panahi A, et al. J Phys Chem B. 2010 Jan 28;114(3):1407-16. doi: 10.1021/jp907366g. J Phys Chem B. 2010. PMID: 20043654 Free article.

4

Effect of flanking residues on the conformational sampling of the internal fusion peptide from Ebola virus.

Jaskierny AJ, Panahi A, Feig M. Jaskierny AJ, et al. Among authors: panahi a. Proteins. 2011 Apr;79(4):1109-17. doi: 10.1002/prot.22947. Epub 2011 Jan 18. Proteins. 2011. PMID: 21246633 Free PMC article.

5

Membrane environment modulates the pKa values of transmembrane helices.

Panahi A, Brooks CL 3rd. Panahi A, et al. J Phys Chem B. 2015 Apr 2;119(13):4601-7. doi: 10.1021/acs.jpcb.5b00289. Epub 2015 Mar 22. J Phys Chem B. 2015. PMID: 25734901 Free PMC article.

6

Probing Site-Specific Structural Information of Peptides at Model Membrane Interface In Situ.

Ding B, Panahi A, Ho JJ, Laaser JE, Brooks CL 3rd, Zanni MT, Chen Z. Ding B, et al. Among authors: panahi a. J Am Chem Soc. 2015 Aug 19;137(32):10190-8. doi: 10.1021/jacs.5b04024. Epub 2015 Aug 11. J Am Chem Soc. 2015. PMID: 26241117 Free PMC article.

7

Hamiltonian Mapping Revisited: Calibrating Minimalist Models to Capture Molecular Recognition by Intrinsically Disordered Proteins.

Law SM, Ahlstrom LS, Panahi A, Brooks CL 3rd. Law SM, et al. Among authors: panahi a. J Phys Chem Lett. 2014 Oct 2;5(19):3441-3444. doi: 10.1021/jz501811k. Epub 2014 Sep 19. J Phys Chem Lett. 2014. PMID: 25289116 Free PMC article.

8

Critical size dependence of domain formation observed in coarse-grained simulations of bilayers composed of ternary lipid mixtures.

Pantelopulos GA, Nagai T, Bandara A, Panahi A, Straub JE. Pantelopulos GA, et al. Among authors: panahi a. J Chem Phys. 2017 Sep 7;147(9):095101. doi: 10.1063/1.4999709. J Chem Phys. 2017. PMID: 28886648 Free PMC article.

9

M2 amphipathic helices facilitate pH-dependent conformational transition in influenza A virus.

Torabifard H, Panahi A, Brooks CL 3rd. Torabifard H, et al. Among authors: panahi a. Proc Natl Acad Sci U S A. 2020 Feb 18;117(7):3583-3591. doi: 10.1073/pnas.1913385117. Epub 2020 Feb 3. Proc Natl Acad Sci U S A. 2020. PMID: 32015120 Free PMC article.

10

Specific Binding of Cholesterol to C99 Domain of Amyloid Precursor Protein Depends Critically on Charge State of Protein.

Panahi A, Bandara A, Pantelopulos GA, Dominguez L, Straub JE. Panahi A, et al. J Phys Chem Lett. 2016 Sep 15;7(18):3535-41. doi: 10.1021/acs.jpclett.6b01624. Epub 2016 Aug 26. J Phys Chem Lett. 2016. PMID: 27525349 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

75 results

Search Page

Filters