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Acceleration of short and long DNA read mapping without loss of accuracy using suffix array.
Bioinformatics. 2014 Dec 1;30(23):3396-8. doi: 10.1093/bioinformatics/btu553. Epub 2014 Aug 20.
Bioinformatics. 2014.
PMID: 25143289
Free PMC article.
Highly sensitive and ultrafast read mapping for RNA-seq analysis.
Medina I, Tárraga J, Martínez H, Barrachina S, Castillo MI, Paschall J, Salavert-Torres J, Blanquer-Espert I, Hernández-García V, Quintana-Ortí ES, Dopazo J.
Medina I, et al. Among authors: blanquer espert i.
DNA Res. 2016 Apr;23(2):93-100. doi: 10.1093/dnares/dsv039. Epub 2016 Jan 5.
DNA Res. 2016.
PMID: 26740642
Free PMC article.
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Using GPUs for the exact alignment of short-read genetic sequences by means of the Burrows-Wheeler transform.
Salavert Torres J, Blanquer Espert I, Domínguez AT, Hernández García V, Medina Castelló I, Tárraga Giménez J, Dopazo Blázquez J.
Salavert Torres J, et al. Among authors: blanquer espert i.
IEEE/ACM Trans Comput Biol Bioinform. 2012 Jul-Aug;9(4):1245-56. doi: 10.1109/TCBB.2012.49.
IEEE/ACM Trans Comput Biol Bioinform. 2012.
PMID: 22450827
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A systematic approach for using DICOM structured reports in clinical processes: focus on breast cancer.
Medina García R, Torres Serrano E, Segrelles Quilis JD, Blanquer Espert I, Martí Bonmatí L, Almenar Cubells D.
Medina García R, et al. Among authors: blanquer espert i.
J Digit Imaging. 2015 Apr;28(2):132-45. doi: 10.1007/s10278-014-9728-6.
J Digit Imaging. 2015.
PMID: 25200428
Free PMC article.
Review.
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