Ji H - Search Results

1

High-temporal-resolution view of transcription and chromatin states across distinct metabolic states in budding yeast.

Kuang Z, Cai L, Zhang X, Ji H, Tu BP, Boeke JD. Kuang Z, et al. Among authors: ji h. Nat Struct Mol Biol. 2014 Oct;21(10):854-63. doi: 10.1038/nsmb.2881. Epub 2014 Aug 31. Nat Struct Mol Biol. 2014. PMID: 25173176 Free PMC article.

2

Mobile interspersed repeats are major structural variants in the human genome.

Huang CR, Schneider AM, Lu Y, Niranjan T, Shen P, Robinson MA, Steranka JP, Valle D, Civin CI, Wang T, Wheelan SJ, Ji H, Boeke JD, Burns KH. Huang CR, et al. Among authors: ji h. Cell. 2010 Jun 25;141(7):1171-82. doi: 10.1016/j.cell.2010.05.026. Cell. 2010. PMID: 20602999 Free PMC article.

3

Computational analysis of ChIP-seq data.

Ji H. Ji H. Methods Mol Biol. 2010;674:143-59. doi: 10.1007/978-1-60761-854-6_9. Methods Mol Biol. 2010. PMID: 20827590

4

Msn2/4 regulate expression of glycolytic enzymes and control transition from quiescence to growth.

Kuang Z, Pinglay S, Ji H, Boeke JD. Kuang Z, et al. Among authors: ji h. Elife. 2017 Sep 26;6:e29938. doi: 10.7554/eLife.29938. Elife. 2017. PMID: 28949295 Free PMC article.

5

Dynamic motif occupancy (DynaMO) analysis identifies transcription factors and their binding sites driving dynamic biological processes.

Kuang Z, Ji Z, Boeke JD, Ji H. Kuang Z, et al. Among authors: ji h, ji z. Nucleic Acids Res. 2018 Jan 9;46(1):e2. doi: 10.1093/nar/gkx905. Nucleic Acids Res. 2018. PMID: 29325176 Free PMC article.

6

Stress response factors drive regrowth of quiescent cells.

Kuang Z, Ji H, Boeke JD. Kuang Z, et al. Among authors: ji h. Curr Genet. 2018 Aug;64(4):807-810. doi: 10.1007/s00294-018-0813-0. Epub 2018 Feb 17. Curr Genet. 2018. PMID: 29455333 Free PMC article. Review.

7

An integrated software system for analyzing ChIP-chip and ChIP-seq data.

Ji H, Jiang H, Ma W, Johnson DS, Myers RM, Wong WH. Ji H, et al. Nat Biotechnol. 2008 Nov;26(11):1293-300. doi: 10.1038/nbt.1505. Epub 2008 Nov 2. Nat Biotechnol. 2008. PMID: 18978777 Free PMC article.

8

TileProbe: modeling tiling array probe effects using publicly available data.

Judy JT, Ji H. Judy JT, et al. Among authors: ji h. Bioinformatics. 2009 Sep 15;25(18):2369-75. doi: 10.1093/bioinformatics/btp425. Epub 2009 Jul 9. Bioinformatics. 2009. PMID: 19592393 Free PMC article.

9

Cell-type independent MYC target genes reveal a primordial signature involved in biomass accumulation.

Ji H, Wu G, Zhan X, Nolan A, Koh C, De Marzo A, Doan HM, Fan J, Cheadle C, Fallahi M, Cleveland JL, Dang CV, Zeller KI. Ji H, et al. PLoS One. 2011;6(10):e26057. doi: 10.1371/journal.pone.0026057. Epub 2011 Oct 19. PLoS One. 2011. PMID: 22039435 Free PMC article.

10

Dynamics of regulatory networks in the developing mouse retina.

Hwang W, Hackler L Jr, Wu G, Ji H, Zack DJ, Qian J. Hwang W, et al. Among authors: ji h. PLoS One. 2012;7(10):e46521. doi: 10.1371/journal.pone.0046521. Epub 2012 Oct 3. PLoS One. 2012. PMID: 23056331 Free PMC article.

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