Aittokallio T - Search Results

1

Statistical detection of quantitative protein biomarkers provides insights into signaling networks deregulated in acute myeloid leukemia.

Elo LL, Karjalainen R, Ohman T, Hintsanen P, Nyman TA, Heckman CA, Aittokallio T. Elo LL, et al. Among authors: aittokallio t. Proteomics. 2014 Nov;14(21-22):2443-53. doi: 10.1002/pmic.201300460. Epub 2014 Oct 15. Proteomics. 2014. PMID: 25211154

2

Hierarchical grid transformation for image warping in the analysis of two-dimensional electrophoresis gels.

Salmi J, Aittokallio T, Westerholm J, Griese M, Rosengren A, Nyman TA, Lahesmaa R, Nevalainen O. Salmi J, et al. Among authors: aittokallio t. Proteomics. 2002 Nov;2(11):1504-15. doi: 10.1002/1615-9861(200211)2:11<1504::AID-PROT1504>3.0.CO;2-B. Proteomics. 2002. PMID: 12442250

3

Comparison of PDQuest and Progenesis software packages in the analysis of two-dimensional electrophoresis gels.

Rosengren AT, Salmi JM, Aittokallio T, Westerholm J, Lahesmaa R, Nyman TA, Nevalainen OS. Rosengren AT, et al. Among authors: aittokallio t. Proteomics. 2003 Oct;3(10):1936-46. doi: 10.1002/pmic.200300544. Proteomics. 2003. PMID: 14625856

4

Geometrical distortions in two-dimensional gels: applicable correction methods.

Aittokallio T, Salmi J, Nyman TA, Nevalainen OS. Aittokallio T, et al. J Chromatogr B Analyt Technol Biomed Life Sci. 2005 Feb 5;815(1-2):25-37. doi: 10.1016/j.jchromb.2004.07.037. J Chromatogr B Analyt Technol Biomed Life Sci. 2005. PMID: 15652796 Review.

5

A comparative evaluation of software for the analysis of liquid chromatography-tandem mass spectrometry data from isotope coded affinity tag experiments.

Moulder R, Filén JJ, Salmi J, Katajamaa M, Nevalainen OS, Oresic M, Aittokallio T, Lahesmaa R, Nyman TA. Moulder R, et al. Among authors: aittokallio t. Proteomics. 2005 Jul;5(11):2748-60. doi: 10.1002/pmic.200401187. Proteomics. 2005. PMID: 15952233

6

Quality classification of tandem mass spectrometry data.

Salmi J, Moulder R, Filén JJ, Nevalainen OS, Nyman TA, Lahesmaa R, Aittokallio T. Salmi J, et al. Among authors: aittokallio t. Bioinformatics. 2006 Feb 15;22(4):400-6. doi: 10.1093/bioinformatics/bti829. Epub 2005 Dec 13. Bioinformatics. 2006. PMID: 16352652

7

Integrating probe-level expression changes across generations of Affymetrix arrays.

Elo LL, Lahti L, Skottman H, Kyläniemi M, Lahesmaa R, Aittokallio T. Elo LL, et al. Among authors: aittokallio t. Nucleic Acids Res. 2005 Dec 14;33(22):e193. doi: 10.1093/nar/gni193. Nucleic Acids Res. 2005. PMID: 16356924 Free PMC article.

8

Improving missing value estimation in microarray data with gene ontology.

Tuikkala J, Elo L, Nevalainen OS, Aittokallio T. Tuikkala J, et al. Among authors: aittokallio t. Bioinformatics. 2006 Mar 1;22(5):566-72. doi: 10.1093/bioinformatics/btk019. Epub 2005 Dec 23. Bioinformatics. 2006. PMID: 16377613

9

Th1 response and cytotoxicity genes are down-regulated in cutaneous T-cell lymphoma.

Hahtola S, Tuomela S, Elo L, Häkkinen T, Karenko L, Nedoszytko B, Heikkilä H, Saarialho-Kere U, Roszkiewicz J, Aittokallio T, Lahesmaa R, Ranki A. Hahtola S, et al. Among authors: aittokallio t. Clin Cancer Res. 2006 Aug 15;12(16):4812-21. doi: 10.1158/1078-0432.CCR-06-0532. Clin Cancer Res. 2006. PMID: 16914566

10

Improving identification of differentially expressed genes by integrative analysis of Affymetrix and Illumina arrays.

Elo LL, Katajamaa M, Lund R, Oresic M, Lahesmaa R, Aittokallio T. Elo LL, et al. Among authors: aittokallio t. OMICS. 2006 Fall;10(3):369-80. doi: 10.1089/omi.2006.10.369. OMICS. 2006. PMID: 17069514

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