Alvarez MJ - Search Results

1

Identification of causal genetic drivers of human disease through systems-level analysis of regulatory networks.

Chen JC, Alvarez MJ, Talos F, Dhruv H, Rieckhof GE, Iyer A, Diefes KL, Aldape K, Berens M, Shen MM, Califano A. Chen JC, et al. Among authors: alvarez mj. Cell. 2014 Oct 9;159(2):402-14. doi: 10.1016/j.cell.2014.09.021. Cell. 2014. PMID: 25303533 Free PMC article.

2

A complementary role for ELF3 and TFL1 in the regulation of flowering time by ambient temperature.

Strasser B, Alvarez MJ, Califano A, Cerdán PD. Strasser B, et al. Among authors: alvarez mj. Plant J. 2009 May;58(4):629-40. doi: 10.1111/j.1365-313X.2009.03811.x. Epub 2009 Feb 2. Plant J. 2009. PMID: 19187043 Free article.

3

Dissecting the interface between signaling and transcriptional regulation in human B cells.

Wang K, Alvarez MJ, Bisikirska BC, Linding R, Basso K, Dalla Favera R, Califano A. Wang K, et al. Among authors: alvarez mj. Pac Symp Biocomput. 2009:264-75. Pac Symp Biocomput. 2009. PMID: 19209707 Free PMC article.

4

Genome-wide identification of post-translational modulators of transcription factor activity in human B cells.

Wang K, Saito M, Bisikirska BC, Alvarez MJ, Lim WK, Rajbhandari P, Shen Q, Nemenman I, Basso K, Margolin AA, Klein U, Dalla-Favera R, Califano A. Wang K, et al. Among authors: alvarez mj. Nat Biotechnol. 2009 Sep;27(9):829-39. doi: 10.1038/nbt.1563. Epub 2009 Sep 9. Nat Biotechnol. 2009. PMID: 19741643 Free PMC article.

5

Integrated biochemical and computational approach identifies BCL6 direct target genes controlling multiple pathways in normal germinal center B cells.

Basso K, Saito M, Sumazin P, Margolin AA, Wang K, Lim WK, Kitagawa Y, Schneider C, Alvarez MJ, Califano A, Dalla-Favera R. Basso K, et al. Among authors: alvarez mj. Blood. 2010 Feb 4;115(5):975-84. doi: 10.1182/blood-2009-06-227017. Epub 2009 Dec 3. Blood. 2010. PMID: 19965633 Free PMC article.

6

The transcriptional network for mesenchymal transformation of brain tumours.

Carro MS, Lim WK, Alvarez MJ, Bollo RJ, Zhao X, Snyder EY, Sulman EP, Anne SL, Doetsch F, Colman H, Lasorella A, Aldape K, Califano A, Iavarone A. Carro MS, et al. Among authors: alvarez mj. Nature. 2010 Jan 21;463(7279):318-25. doi: 10.1038/nature08712. Epub 2009 Dec 23. Nature. 2010. PMID: 20032975 Free PMC article.

7

Correlating measurements across samples improves accuracy of large-scale expression profile experiments.

Alvarez MJ, Sumazin P, Rajbhandari P, Califano A. Alvarez MJ, et al. Genome Biol. 2009;10(12):R143. doi: 10.1186/gb-2009-10-12-r143. Epub 2009 Dec 30. Genome Biol. 2009. PMID: 20042104 Free PMC article.

8

A human B-cell interactome identifies MYB and FOXM1 as master regulators of proliferation in germinal centers.

Lefebvre C, Rajbhandari P, Alvarez MJ, Bandaru P, Lim WK, Sato M, Wang K, Sumazin P, Kustagi M, Bisikirska BC, Basso K, Beltrao P, Krogan N, Gautier J, Dalla-Favera R, Califano A. Lefebvre C, et al. Among authors: alvarez mj. Mol Syst Biol. 2010 Jun 8;6:377. doi: 10.1038/msb.2010.31. Mol Syst Biol. 2010. PMID: 20531406 Free PMC article.

9

Regulation of extra-embryonic endoderm stem cell differentiation by Nodal and Cripto signaling.

Kruithof-de Julio M, Alvarez MJ, Galli A, Chu J, Price SM, Califano A, Shen MM. Kruithof-de Julio M, et al. Among authors: alvarez mj. Development. 2011 Sep;138(18):3885-95. doi: 10.1242/dev.065656. Development. 2011. PMID: 21862554 Free PMC article.

10

PFT1, the MED25 subunit of the plant Mediator complex, promotes flowering through CONSTANS dependent and independent mechanisms in Arabidopsis.

Iñigo S, Alvarez MJ, Strasser B, Califano A, Cerdán PD. Iñigo S, et al. Among authors: alvarez mj. Plant J. 2012 Feb;69(4):601-12. doi: 10.1111/j.1365-313X.2011.04815.x. Epub 2011 Nov 16. Plant J. 2012. PMID: 21985558 Free article.

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