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Page 1
Complete Genome Sequence of Salmonella enterica subsp. enterica Serovar Enteritidis Strain SEJ.
Bishop-Lilly KA, Frey KG, Daligault HE, Davenport KW, Bruce DC, Chain PS, Coyne SR, Chertkov O, Freitas T, Jaissle J, Koroleva GI, Ladner JT, Minogue TD, Palacios GF, Redden CL, Xu Y, Johnson SL. Bishop-Lilly KA, et al. Among authors: davenport kw. Genome Announc. 2014 Oct 23;2(5):e01084-14. doi: 10.1128/genomeA.01084-14. Genome Announc. 2014. PMID: 25342692 Free PMC article.
Genomics for key players in the N cycle from guinea pigs to the next frontier.
Chain PS, Xie G, Starkenburg SR, Scholz MB, Beckloff N, Lo CC, Davenport KW, Reitenga KG, Daligault HE, Detter JC, Freitas TA, Gleasner CD, Green LD, Han CS, McMurry KK, Meincke LJ, Shen X, Zeytun A. Chain PS, et al. Among authors: davenport kw. Methods Enzymol. 2011;496:289-318. doi: 10.1016/B978-0-12-386489-5.00012-9. Methods Enzymol. 2011. PMID: 21514469 Review.
Improving genome assemblies by sequencing PCR products with PacBio.
Zhang X, Davenport KW, Gu W, Daligault HE, Munk AC, Tashima H, Reitenga K, Green LD, Han CS. Zhang X, et al. Among authors: davenport kw. Biotechniques. 2012 Jul;53(1):61-2. doi: 10.2144/0000113891. Biotechniques. 2012. PMID: 22780321 Free article.
Genomic comparison of Escherichia coli O104:H4 isolates from 2009 and 2011 reveals plasmid, and prophage heterogeneity, including shiga toxin encoding phage stx2.
Ahmed SA, Awosika J, Baldwin C, Bishop-Lilly KA, Biswas B, Broomall S, Chain PS, Chertkov O, Chokoshvili O, Coyne S, Davenport K, Detter JC, Dorman W, Erkkila TH, Folster JP, Frey KG, George M, Gleasner C, Henry M, Hill KK, Hubbard K, Insalaco J, Johnson S, Kitzmiller A, Krepps M, Lo CC, Luu T, McNew LA, Minogue T, Munk CA, Osborne B, Patel M, Reitenga KG, Rosenzweig CN, Shea A, Shen X, Strockbine N, Tarr C, Teshima H, van Gieson E, Verratti K, Wolcott M, Xie G, Sozhamannan S, Gibbons HS; Threat Characterization Consortium. Ahmed SA, et al. PLoS One. 2012;7(11):e48228. doi: 10.1371/journal.pone.0048228. Epub 2012 Nov 1. PLoS One. 2012. PMID: 23133618 Free PMC article.
Nearly finished genomes produced using gel microdroplet culturing reveal substantial intraspecies genomic diversity within the human microbiome.
Fitzsimons MS, Novotny M, Lo CC, Dichosa AE, Yee-Greenbaum JL, Snook JP, Gu W, Chertkov O, Davenport KW, McMurry K, Reitenga KG, Daughton AR, He J, Johnson SL, Gleasner CD, Wills PL, Parson-Quintana B, Chain PS, Detter JC, Lasken RS, Han CS. Fitzsimons MS, et al. Among authors: davenport kw. Genome Res. 2013 May;23(5):878-88. doi: 10.1101/gr.142208.112. Epub 2013 Mar 14. Genome Res. 2013. PMID: 23493677 Free PMC article.
Complete Genome of Serratia sp. Strain FGI 94, a Strain Associated with Leaf-Cutter Ant Fungus Gardens.
Aylward FO, Tremmel DM, Starrett GJ, Bruce DC, Chain P, Chen A, Davenport KW, Detter C, Han CS, Han J, Huntemann M, Ivanova NN, Kyrpides NC, Markowitz V, Mavrommatis K, Nolan M, Pagani I, Pati A, Pitluck S, Teshima H, Deshpande S, Goodwin L, Woyke T, Currie CR. Aylward FO, et al. Among authors: davenport kw. Genome Announc. 2013 Mar 14;1(2):e0023912. doi: 10.1128/genomeA.00239-12. Genome Announc. 2013. PMID: 23516234 Free PMC article.
Draft Genome Sequence of Methylomicrobium buryatense Strain 5G, a Haloalkaline-Tolerant Methanotrophic Bacterium.
Khmelenina VN, Beck DA, Munk C, Davenport K, Daligault H, Erkkila T, Goodwin L, Gu W, Lo CC, Scholz M, Teshima H, Xu Y, Chain P, Bringel F, Vuilleumier S, Dispirito A, Dunfield P, Jetten MS, Klotz MG, Knief C, Murrell JC, Op den Camp HJ, Sakai Y, Semrau J, Svenning M, Stein LY, Trotsenko YA, Kalyuzhnaya MG. Khmelenina VN, et al. Genome Announc. 2013 Jun 27;1(4):e00053-13. doi: 10.1128/genomeA.00053-13. Genome Announc. 2013. PMID: 23814105 Free PMC article.
141 results