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An epigenomic roadmap to induced pluripotency reveals DNA methylation as a reprogramming modulator.
Lee DS, Shin JY, Tonge PD, Puri MC, Lee S, Park H, Lee WC, Hussein SM, Bleazard T, Yun JY, Kim J, Li M, Cloonan N, Wood D, Clancy JL, Mosbergen R, Yi JH, Yang KS, Kim H, Rhee H, Wells CA, Preiss T, Grimmond SM, Rogers IM, Nagy A, Seo JS. Lee DS, et al. Among authors: kim h, kim j. Nat Commun. 2014 Dec 10;5:5619. doi: 10.1038/ncomms6619. Nat Commun. 2014. PMID: 25493341 Free PMC article.
A highly annotated whole-genome sequence of a Korean individual.
Kim JI, Ju YS, Park H, Kim S, Lee S, Yi JH, Mudge J, Miller NA, Hong D, Bell CJ, Kim HS, Chung IS, Lee WC, Lee JS, Seo SH, Yun JY, Woo HN, Lee H, Suh D, Lee S, Kim HJ, Yavartanoo M, Kwak M, Zheng Y, Lee MK, Park H, Kim JY, Gokcumen O, Mills RE, Zaranek AW, Thakuria J, Wu X, Kim RW, Huntley JJ, Luo S, Schroth GP, Wu TD, Kim H, Yang KS, Park WY, Kim H, Church GM, Lee C, Kingsmore SF, Seo JS. Kim JI, et al. Among authors: kim jy, kim h, kim hj, kim rw, kim s, kim hs. Nature. 2009 Aug 20;460(7258):1011-5. doi: 10.1038/nature08211. Epub 2009 Jul 8. Nature. 2009. PMID: 19587683 Free PMC article.
Extensive genomic and transcriptional diversity identified through massively parallel DNA and RNA sequencing of eighteen Korean individuals.
Ju YS, Kim JI, Kim S, Hong D, Park H, Shin JY, Lee S, Lee WC, Kim S, Yu SB, Park SS, Seo SH, Yun JY, Kim HJ, Lee DS, Yavartanoo M, Kang HP, Gokcumen O, Govindaraju DR, Jung JH, Chong H, Yang KS, Kim H, Lee C, Seo JS. Ju YS, et al. Among authors: kim ji, kim h, kim hj, kim s. Nat Genet. 2011 Jul 3;43(8):745-52. doi: 10.1038/ng.872. Nat Genet. 2011. PMID: 21725310
Discovery of common Asian copy number variants using integrated high-resolution array CGH and massively parallel DNA sequencing.
Park H, Kim JI, Ju YS, Gokcumen O, Mills RE, Kim S, Lee S, Suh D, Hong D, Kang HP, Yoo YJ, Shin JY, Kim HJ, Yavartanoo M, Chang YW, Ha JS, Chong W, Hwang GR, Darvishi K, Kim H, Yang SJ, Yang KS, Kim H, Hurles ME, Scherer SW, Carter NP, Tyler-Smith C, Lee C, Seo JS. Park H, et al. Among authors: kim ji, kim h, kim hj, kim s. Nat Genet. 2010 May;42(5):400-5. doi: 10.1038/ng.555. Epub 2010 Apr 4. Nat Genet. 2010. PMID: 20364138 Free PMC article.
Whole genome and global gene expression analyses of the model mushroom Flammulina velutipes reveal a high capacity for lignocellulose degradation.
Park YJ, Baek JH, Lee S, Kim C, Rhee H, Kim H, Seo JS, Park HR, Yoon DE, Nam JY, Kim HI, Kim JG, Yoon H, Kang HW, Cho JY, Song ES, Sung GH, Yoo YB, Lee CS, Lee BM, Kong WS. Park YJ, et al. Among authors: kim h, kim hi, kim c, kim jg. PLoS One. 2014 Apr 8;9(4):e93560. doi: 10.1371/journal.pone.0093560. eCollection 2014. PLoS One. 2014. PMID: 24714189 Free PMC article.
The genome sequence of the ethanologenic bacterium Zymomonas mobilis ZM4.
Seo JS, Chong H, Park HS, Yoon KO, Jung C, Kim JJ, Hong JH, Kim H, Kim JH, Kil JI, Park CJ, Oh HM, Lee JS, Jin SJ, Um HW, Lee HJ, Oh SJ, Kim JY, Kang HL, Lee SY, Lee KJ, Kang HS. Seo JS, et al. Among authors: kim jy, kim jj, kim h, kim jh. Nat Biotechnol. 2005 Jan;23(1):63-8. doi: 10.1038/nbt1045. Epub 2004 Dec 12. Nat Biotechnol. 2005. PMID: 15592456 Free PMC article.
The genome sequence of Xanthomonas oryzae pathovar oryzae KACC10331, the bacterial blight pathogen of rice.
Lee BM, Park YJ, Park DS, Kang HW, Kim JG, Song ES, Park IC, Yoon UH, Hahn JH, Koo BS, Lee GB, Kim H, Park HS, Yoon KO, Kim JH, Jung CH, Koh NH, Seo JS, Go SJ. Lee BM, et al. Among authors: kim h, kim jg, kim jh. Nucleic Acids Res. 2005 Jan 26;33(2):577-86. doi: 10.1093/nar/gki206. Print 2005. Nucleic Acids Res. 2005. PMID: 15673718 Free PMC article.
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