Stone MP - Search Results

1

Differential stabilities and sequence-dependent base pair opening dynamics of Watson-Crick base pairs with 5-hydroxymethylcytosine, 5-formylcytosine, or 5-carboxylcytosine.

Szulik MW, Pallan PS, Nocek B, Voehler M, Banerjee S, Brooks S, Joachimiak A, Egli M, Eichman BF, Stone MP. Szulik MW, et al. Among authors: stone mp. Biochemistry. 2015 Feb 10;54(5):1294-305. doi: 10.1021/bi501534x. Epub 2015 Jan 29. Biochemistry. 2015. PMID: 25632825 Free PMC article.

2

Intercalation of aflatoxin B1 in two oligodeoxynucleotide adducts: comparative 1H NMR analysis of d(ATCAFBGAT).d(ATCGAT) and d(ATAFBGCAT)2.

Gopalakrishnan S, Harris TM, Stone MP. Gopalakrishnan S, et al. Among authors: stone mp. Biochemistry. 1990 Nov 20;29(46):10438-48. doi: 10.1021/bi00498a002. Biochemistry. 1990. PMID: 2125491

3

Non-Watson-Crick structures in oligodeoxynucleotides: self-association of d(TpCpGpA) stabilized at acidic pH.

Topping RJ, Stone MP, Brush CK, Harris TM. Topping RJ, et al. Among authors: stone mp. Biochemistry. 1988 Sep 20;27(19):7216-22. doi: 10.1021/bi00419a008. Biochemistry. 1988. PMID: 3207671

4

Major groove (R)-alpha-(N6-adenyl)styrene oxide adducts in an oligodeoxynucleotide containing the human N-ras codon 61 sequence: conformations of the R(61,2) and R(61,3) sequence isomers from 1H NMR.

Feng B, Zhou L, Passarelli M, Harris CM, Harris TM, Stone MP. Feng B, et al. Among authors: stone mp. Biochemistry. 1995 Oct 31;34(43):14021-36. doi: 10.1021/bi00043a008. Biochemistry. 1995. PMID: 7578000

5

Refined solution structure of 8,9-dihydro-8-(N7-guanyl)-9-hydroxyaflatoxin B1 opposite CpA in the complementary strand of an oligodeoxynucleotide duplex as determined by 1H NMR.

Johnston DS, Stone MP. Johnston DS, et al. Among authors: stone mp. Biochemistry. 1995 Oct 31;34(43):14037-50. doi: 10.1021/bi00043a009. Biochemistry. 1995. PMID: 7578001

6

Structure of a duplex oligodeoxynucleotide containing propanodeoxyguanosine opposite a two-base deletion in the (CpG)3 frame shift hotspot of Salmonella typhimurium hisD3052 determined by 1H NMR and restrained molecular dynamics.

Weisenseel JP, Moe JG, Reddy GR, Marnett LJ, Stone MP. Weisenseel JP, et al. Among authors: stone mp. Biochemistry. 1995 Jan 10;34(1):50-64. doi: 10.1021/bi00001a007. Biochemistry. 1995. PMID: 7819223

7

Styrene oxide adducts in an oligodeoxynucleotide containing the human N-ras codon 12 sequence: structural refinement of the minor groove R(12,2)- and S(12,2)-alpha-(N2-guanyl) stereoisomers from 1H NMR.

Zegar IS, Setayesh FR, DeCorte BL, Harris CM, Harris TM, Stone MP. Zegar IS, et al. Among authors: stone mp. Biochemistry. 1996 Apr 9;35(14):4334-48. doi: 10.1021/bi952086s. Biochemistry. 1996. PMID: 8605182

8

Major groove (S)-alpha-(N6-adenyl)styrene oxide adducts in an oligodeoxynucleotide containing the human N-ras codon 61 sequence: conformations of the S(61,2) and S(61,3) sequence isomers from 1H NMR.

Feng B, Voehler M, Zhou L, Passarelli M, Harris CM, Harris TM, Stone MP. Feng B, et al. Among authors: stone mp. Biochemistry. 1996 Jun 11;35(23):7316-29. doi: 10.1021/bi952526f. Biochemistry. 1996. PMID: 8652508

9

An intercalated and thermally stable FAPY adduct of aflatoxin B1 in a DNA duplex: structural refinement from 1H NMR.

Mao H, Deng Z, Wang F, Harris TM, Stone MP. Mao H, et al. Among authors: stone mp. Biochemistry. 1998 Mar 31;37(13):4374-87. doi: 10.1021/bi9718292. Biochemistry. 1998. PMID: 9521757

10

Multiple conformations of an intercalated (-)-(7S,8R,9S, 10R)-N6-[10-(7,8,9,10-tetrahydrobenzo[a]pyrenyl)]-2'-deoxyadenosyl adduct in the N-ras codon 61 sequence.

Zegar IS, Chary P, Jabil RJ, Tamura PJ, Johansen TN, Lloyd RS, Harris CM, Harris TM, Stone MP. Zegar IS, et al. Among authors: stone mp. Biochemistry. 1998 Nov 24;37(47):16516-28. doi: 10.1021/bi9817616. Biochemistry. 1998. PMID: 9843418

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