Xie L - Search Results

1

Identification of HPV integration and gene mutation in HeLa cell line by integrated analysis of RNA-Seq and MS/MS data.

Sun H, Chen C, Lian B, Zhang M, Wang X, Zhang B, Li Y, Yang P, Xie L. Sun H, et al. Among authors: xie l. J Proteome Res. 2015 Apr 3;14(4):1678-86. doi: 10.1021/pr500944c. Epub 2015 Mar 10. J Proteome Res. 2015. PMID: 25698088

2

Genomic and proteomic analysis of mammary tumors arising in transgenic mice.

Xie L, Xu BJ, Gorska AE, Shyr Y, Schwartz SA, Cheng N, Levy S, Bierie B, Caprioli RM, Moses HL. Xie L, et al. J Proteome Res. 2005 Nov-Dec;4(6):2088-98. doi: 10.1021/pr050214l. J Proteome Res. 2005. PMID: 16335954

3

Transcript-level annotation of Affymetrix probesets improves the interpretation of gene expression data.

Yu H, Wang F, Tu K, Xie L, Li YY, Li YX. Yu H, et al. Among authors: xie l. BMC Bioinformatics. 2007 Jun 11;8:194. doi: 10.1186/1471-2105-8-194. BMC Bioinformatics. 2007. PMID: 17559689 Free PMC article.

4

The combination approach of SVM and ECOC for powerful identification and classification of transcription factor.

Zheng G, Qian Z, Yang Q, Wei C, Xie L, Zhu Y, Li Y. Zheng G, et al. Among authors: xie l. BMC Bioinformatics. 2008 Jun 16;9:282. doi: 10.1186/1471-2105-9-282. BMC Bioinformatics. 2008. PMID: 18554421 Free PMC article.

5

The prediction of interferon treatment effects based on time series microarray gene expression profiles.

Huang T, Tu K, Shyr Y, Wei CC, Xie L, Li YX. Huang T, et al. Among authors: xie l. J Transl Med. 2008 Aug 9;6:44. doi: 10.1186/1479-5876-6-44. J Transl Med. 2008. PMID: 18691426 Free PMC article.

6

ITFP: an integrated platform of mammalian transcription factors.

Zheng G, Tu K, Yang Q, Xiong Y, Wei C, Xie L, Zhu Y, Li Y. Zheng G, et al. Among authors: xie l. Bioinformatics. 2008 Oct 15;24(20):2416-7. doi: 10.1093/bioinformatics/btn439. Epub 2008 Aug 19. Bioinformatics. 2008. PMID: 18713790

7

MiRE: a graphical R package for microRNA-related analysis.

Yan XQ, Tu K, Xie L, Li YX, Yin B, Gong YH, Yuan JG, Qiang BQ, Peng XZ. Yan XQ, et al. Among authors: xie l. Chin Med Sci J. 2008 Dec;23(4):202-4. doi: 10.1016/s1001-9294(09)60039-0. Chin Med Sci J. 2008. PMID: 19180879

8

PAnnBuilder: an R package for assembling proteomic annotation data.

Li H, Ding G, Xie L, Li Y. Li H, et al. Among authors: xie l. Bioinformatics. 2009 Apr 15;25(8):1094-5. doi: 10.1093/bioinformatics/btp100. Epub 2009 Feb 23. Bioinformatics. 2009. PMID: 19237448

9

SysPTM: a systematic resource for proteomic research on post-translational modifications.

Li H, Xing X, Ding G, Li Q, Wang C, Xie L, Zeng R, Li Y. Li H, et al. Among authors: xie l. Mol Cell Proteomics. 2009 Aug;8(8):1839-49. doi: 10.1074/mcp.M900030-MCP200. Epub 2009 Apr 14. Mol Cell Proteomics. 2009. PMID: 19366988 Free PMC article.

10

Identification and target prediction of miRNAs specifically expressed in rat neural tissue.

Hua YJ, Tang ZY, Tu K, Zhu L, Li YX, Xie L, Xiao HS. Hua YJ, et al. Among authors: xie l. BMC Genomics. 2009 May 9;10:214. doi: 10.1186/1471-2164-10-214. BMC Genomics. 2009. PMID: 19426523 Free PMC article.

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