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Long non-coding RNAs control hematopoietic stem cell function.
Luo M, Jeong M, Sun D, Park HJ, Rodriguez BA, Xia Z, Yang L, Zhang X, Sheng K, Darlington GJ, Li W, Goodell MA. Luo M, et al. Among authors: sun d. Cell Stem Cell. 2015 Apr 2;16(4):426-38. doi: 10.1016/j.stem.2015.02.002. Epub 2015 Mar 12. Cell Stem Cell. 2015. PMID: 25772072 Free PMC article.
Dnmt3a is essential for hematopoietic stem cell differentiation.
Challen GA, Sun D, Jeong M, Luo M, Jelinek J, Berg JS, Bock C, Vasanthakumar A, Gu H, Xi Y, Liang S, Lu Y, Darlington GJ, Meissner A, Issa JP, Godley LA, Li W, Goodell MA. Challen GA, et al. Among authors: sun d. Nat Genet. 2011 Dec 4;44(1):23-31. doi: 10.1038/ng.1009. Nat Genet. 2011. PMID: 22138693 Free PMC article.
BSeQC: quality control of bisulfite sequencing experiments.
Lin X, Sun D, Rodriguez B, Zhao Q, Sun H, Zhang Y, Li W. Lin X, et al. Among authors: sun d, sun h. Bioinformatics. 2013 Dec 15;29(24):3227-9. doi: 10.1093/bioinformatics/btt548. Epub 2013 Sep 23. Bioinformatics. 2013. PMID: 24064417 Free PMC article.
Large conserved domains of low DNA methylation maintained by Dnmt3a.
Jeong M, Sun D, Luo M, Huang Y, Challen GA, Rodriguez B, Zhang X, Chavez L, Wang H, Hannah R, Kim SB, Yang L, Ko M, Chen R, Göttgens B, Lee JS, Gunaratne P, Godley LA, Darlington GJ, Rao A, Li W, Goodell MA. Jeong M, et al. Among authors: sun d. Nat Genet. 2014 Jan;46(1):17-23. doi: 10.1038/ng.2836. Epub 2013 Nov 24. Nat Genet. 2014. PMID: 24270360 Free PMC article.
MOABS: model based analysis of bisulfite sequencing data.
Sun D, Xi Y, Rodriguez B, Park HJ, Tong P, Meong M, Goodell MA, Li W. Sun D, et al. Genome Biol. 2014 Feb 24;15(2):R38. doi: 10.1186/gb-2014-15-2-r38. Genome Biol. 2014. PMID: 24565500 Free PMC article.
Dnmt3a and Dnmt3b have overlapping and distinct functions in hematopoietic stem cells.
Challen GA, Sun D, Mayle A, Jeong M, Luo M, Rodriguez B, Mallaney C, Celik H, Yang L, Xia Z, Cullen S, Berg J, Zheng Y, Darlington GJ, Li W, Goodell MA. Challen GA, et al. Among authors: sun d. Cell Stem Cell. 2014 Sep 4;15(3):350-364. doi: 10.1016/j.stem.2014.06.018. Epub 2014 Aug 14. Cell Stem Cell. 2014. PMID: 25130491 Free PMC article.
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