Merski M - Search Results

1

Homologous ligands accommodated by discrete conformations of a buried cavity.

Merski M, Fischer M, Balius TE, Eidam O, Shoichet BK. Merski M, et al. Proc Natl Acad Sci U S A. 2015 Apr 21;112(16):5039-44. doi: 10.1073/pnas.1500806112. Epub 2015 Apr 6. Proc Natl Acad Sci U S A. 2015. PMID: 25847998 Free PMC article.

2

Engineering a model protein cavity to catalyze the Kemp elimination.

Merski M, Shoichet BK. Merski M, et al. Proc Natl Acad Sci U S A. 2012 Oct 2;109(40):16179-83. doi: 10.1073/pnas.1208076109. Epub 2012 Sep 17. Proc Natl Acad Sci U S A. 2012. PMID: 22988064 Free PMC article.

3

The impact of introducing a histidine into an apolar cavity site on docking and ligand recognition.

Merski M, Shoichet BK. Merski M, et al. J Med Chem. 2013 Apr 11;56(7):2874-84. doi: 10.1021/jm301823g. Epub 2013 Mar 20. J Med Chem. 2013. PMID: 23473072 Free PMC article.

4

Prediction and validation of enzyme and transporter off-targets for metformin.

Yee SW, Lin L, Merski M, Keiser MJ, Gupta A, Zhang Y, Chien HC, Shoichet BK, Giacomini KM. Yee SW, et al. Among authors: merski m. J Pharmacokinet Pharmacodyn. 2015 Oct;42(5):463-75. doi: 10.1007/s10928-015-9436-y. Epub 2015 Sep 3. J Pharmacokinet Pharmacodyn. 2015. PMID: 26335661 Free PMC article.

5

Self-analysis of repeat proteins reveals evolutionarily conserved patterns.

Merski M, Młynarczyk K, Ludwiczak J, Skrzeczkowski J, Dunin-Horkawicz S, Górna MW. Merski M, et al. BMC Bioinformatics. 2020 May 7;21(1):179. doi: 10.1186/s12859-020-3493-y. BMC Bioinformatics. 2020. PMID: 32381046 Free PMC article.

6

A Geometric Definition of Short to Medium Range Hydrogen-Mediated Interactions in Proteins.

Merski M, Skrzeczkowski J, Roth JK, Górna MW. Merski M, et al. Molecules. 2020 Nov 15;25(22):5326. doi: 10.3390/molecules25225326. Molecules. 2020. PMID: 33203097 Free PMC article.

7

The Repeating, Modular Architecture of the HtrA Proteases.

Merski M, Macedo-Ribeiro S, Wieczorek RM, Górna MW. Merski M, et al. Biomolecules. 2022 Jun 7;12(6):793. doi: 10.3390/biom12060793. Biomolecules. 2022. PMID: 35740918 Free PMC article.

8

A simple model for the total number of SARS-CoV-2 infections on a national level.

Blanco N, Stafford KA, Lavoie MC, Brandenburg A, Górna MW, Merski M. Blanco N, et al. Among authors: merski m. Epidemiol Infect. 2021 Mar 25;149:e80. doi: 10.1017/S0950268821000649. Epidemiol Infect. 2021. PMID: 33762052 Free PMC article.

9

PlaToLoCo: the first web meta-server for visualization and annotation of low complexity regions in proteins.

Jarnot P, Ziemska-Legiecka J, Dobson L, Merski M, Mier P, Andrade-Navarro MA, Hancock JM, Dosztányi Z, Paladin L, Necci M, Piovesan D, Tosatto SCE, Promponas VJ, Grynberg M, Gruca A. Jarnot P, et al. Among authors: merski m. Nucleic Acids Res. 2020 Jul 2;48(W1):W77-W84. doi: 10.1093/nar/gkaa339. Nucleic Acids Res. 2020. PMID: 32421769 Free PMC article.

10

Molecular motion regulates the activity of the Mitochondrial Serine Protease HtrA2.

Merski M, Moreira C, Abreu RM, Ramos MJ, Fernandes PA, Martins LM, Pereira PJB, Macedo-Ribeiro S. Merski M, et al. Cell Death Dis. 2017 Oct 12;8(10):e3119. doi: 10.1038/cddis.2017.487. Cell Death Dis. 2017. PMID: 29022916 Free PMC article.

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