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Silence on the relevant literature and errors in implementation.
Bastiaens P, Birtwistle MR, Blüthgen N, Bruggeman FJ, Cho KH, Cosentino C, de la Fuente A, Hoek JB, Kiyatkin A, Klamt S, Kolch W, Legewie S, Mendes P, Naka T, Santra T, Sontag E, Westerhoff HV, Kholodenko BN. Bastiaens P, et al. Among authors: klamt s. Nat Biotechnol. 2015 Apr;33(4):336-9. doi: 10.1038/nbt.3185. Nat Biotechnol. 2015. PMID: 25850052 No abstract available.
Use of CellNetAnalyzer in biotechnology and metabolic engineering.
von Kamp A, Thiele S, Hädicke O, Klamt S. von Kamp A, et al. Among authors: klamt s. J Biotechnol. 2017 Nov 10;261:221-228. doi: 10.1016/j.jbiotec.2017.05.001. Epub 2017 May 10. J Biotechnol. 2017. PMID: 28499817 Free article. Review.
MUFINS: multi-formalism interaction network simulator.
Wu H, von Kamp A, Leoncikas V, Mori W, Sahin N, Gevorgyan A, Linley C, Grabowski M, Mannan AA, Stoy N, Stewart GR, Ward LT, Lewis DJM, Sroka J, Matsuno H, Klamt S, Westerhoff HV, McFadden J, Plant NJ, Kierzek AM. Wu H, et al. Among authors: klamt s. NPJ Syst Biol Appl. 2016 Nov 17;2:16032. doi: 10.1038/npjsba.2016.32. eCollection 2016. NPJ Syst Biol Appl. 2016. PMID: 28725480 Free PMC article.
MEMOTE for standardized genome-scale metabolic model testing.
Lieven C, Beber ME, Olivier BG, Bergmann FT, Ataman M, Babaei P, Bartell JA, Blank LM, Chauhan S, Correia K, Diener C, Dräger A, Ebert BE, Edirisinghe JN, Faria JP, Feist AM, Fengos G, Fleming RMT, García-Jiménez B, Hatzimanikatis V, van Helvoirt W, Henry CS, Hermjakob H, Herrgård MJ, Kaafarani A, Kim HU, King Z, Klamt S, Klipp E, Koehorst JJ, König M, Lakshmanan M, Lee DY, Lee SY, Lee S, Lewis NE, Liu F, Ma H, Machado D, Mahadevan R, Maia P, Mardinoglu A, Medlock GL, Monk JM, Nielsen J, Nielsen LK, Nogales J, Nookaew I, Palsson BO, Papin JA, Patil KR, Poolman M, Price ND, Resendis-Antonio O, Richelle A, Rocha I, Sánchez BJ, Schaap PJ, Malik Sheriff RS, Shoaie S, Sonnenschein N, Teusink B, Vilaça P, Vik JO, Wodke JAH, Xavier JC, Yuan Q, Zakhartsev M, Zhang C. Lieven C, et al. Among authors: klamt s. Nat Biotechnol. 2020 Mar;38(3):272-276. doi: 10.1038/s41587-020-0446-y. Nat Biotechnol. 2020. PMID: 32123384 Free PMC article. No abstract available.
Hypergraphs and cellular networks.
Klamt S, Haus UU, Theis F. Klamt S, et al. PLoS Comput Biol. 2009 May;5(5):e1000385. doi: 10.1371/journal.pcbi.1000385. Epub 2009 May 29. PLoS Comput Biol. 2009. PMID: 19478865 Free PMC article. No abstract available.
120 results