Kashlev M - Search Results

1

Visualizing translocation dynamics and nascent transcript errors in paused RNA polymerases in vivo.

Imashimizu M, Takahashi H, Oshima T, McIntosh C, Bubunenko M, Court DL, Kashlev M. Imashimizu M, et al. Among authors: kashlev m. Genome Biol. 2015 May 15;16(1):98. doi: 10.1186/s13059-015-0666-5. Genome Biol. 2015. PMID: 25976475 Free PMC article.

2

Functional topography of nascent RNA in elongation intermediates of RNA polymerase.

Komissarova N, Kashlev M. Komissarova N, et al. Among authors: kashlev m. Proc Natl Acad Sci U S A. 1998 Dec 8;95(25):14699-704. doi: 10.1073/pnas.95.25.14699. Proc Natl Acad Sci U S A. 1998. PMID: 9843952 Free PMC article.

3

DNA sequences in gal operon override transcription elongation blocks.

Lewis DE, Komissarova N, Le P, Kashlev M, Adhya S. Lewis DE, et al. Among authors: kashlev m. J Mol Biol. 2008 Oct 17;382(4):843-58. doi: 10.1016/j.jmb.2008.07.060. Epub 2008 Jul 27. J Mol Biol. 2008. PMID: 18691599 Free PMC article.

4

Mechanism of sequence-specific pausing of bacterial RNA polymerase.

Kireeva ML, Kashlev M. Kireeva ML, et al. Among authors: kashlev m. Proc Natl Acad Sci U S A. 2009 Jun 2;106(22):8900-5. doi: 10.1073/pnas.0900407106. Epub 2009 Apr 24. Proc Natl Acad Sci U S A. 2009. PMID: 19416863 Free PMC article.

5

Translocation by multi-subunit RNA polymerases.

Kireeva M, Kashlev M, Burton ZF. Kireeva M, et al. Among authors: kashlev m. Biochim Biophys Acta. 2010 May-Jun;1799(5-6):389-401. doi: 10.1016/j.bbagrm.2010.01.007. Epub 2010 Jan 25. Biochim Biophys Acta. 2010. PMID: 20097318 Review.

6

CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing.

Shukla S, Kavak E, Gregory M, Imashimizu M, Shutinoski B, Kashlev M, Oberdoerffer P, Sandberg R, Oberdoerffer S. Shukla S, et al. Among authors: kashlev m. Nature. 2011 Nov 3;479(7371):74-9. doi: 10.1038/nature10442. Nature. 2011. PMID: 21964334 Free PMC article.

7

Isolation and characterization of transcription fidelity mutants.

Strathern JN, Jin DJ, Court DL, Kashlev M. Strathern JN, et al. Among authors: kashlev m. Biochim Biophys Acta. 2012 Jul;1819(7):694-9. doi: 10.1016/j.bbagrm.2012.02.005. Epub 2012 Feb 16. Biochim Biophys Acta. 2012. PMID: 22366339 Free PMC article. Review.

8

Isolation and characterization of RNA polymerase rpoB mutations that alter transcription slippage during elongation in Escherichia coli.

Zhou YN, Lubkowska L, Hui M, Court C, Chen S, Court DL, Strathern J, Jin DJ, Kashlev M. Zhou YN, et al. Among authors: kashlev m. J Biol Chem. 2013 Jan 25;288(4):2700-10. doi: 10.1074/jbc.M112.429464. Epub 2012 Dec 5. J Biol Chem. 2013. PMID: 23223236 Free PMC article.

9

Intrinsic translocation barrier as an initial step in pausing by RNA polymerase II.

Imashimizu M, Kireeva ML, Lubkowska L, Gotte D, Parks AR, Strathern JN, Kashlev M. Imashimizu M, et al. Among authors: kashlev m. J Mol Biol. 2013 Feb 22;425(4):697-712. doi: 10.1016/j.jmb.2012.12.002. Epub 2012 Dec 10. J Mol Biol. 2013. PMID: 23238253 Free PMC article.

10

Direct assessment of transcription fidelity by high-resolution RNA sequencing.

Imashimizu M, Oshima T, Lubkowska L, Kashlev M. Imashimizu M, et al. Among authors: kashlev m. Nucleic Acids Res. 2013 Oct;41(19):9090-104. doi: 10.1093/nar/gkt698. Epub 2013 Aug 7. Nucleic Acids Res. 2013. PMID: 23925128 Free PMC article.

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