Wong CCL - Search Results

1

ProLuCID: An improved SEQUEST-like algorithm with enhanced sensitivity and specificity.

Xu T, Park SK, Venable JD, Wohlschlegel JA, Diedrich JK, Cociorva D, Lu B, Liao L, Hewel J, Han X, Wong CCL, Fonslow B, Delahunty C, Gao Y, Shah H, Yates JR 3rd. Xu T, et al. Among authors: wong ccl. J Proteomics. 2015 Nov 3;129:16-24. doi: 10.1016/j.jprot.2015.07.001. Epub 2015 Jul 11. J Proteomics. 2015. PMID: 26171723 Free PMC article.

2

BDNF induces widespread changes in synaptic protein content and up-regulates components of the translation machinery: an analysis using high-throughput proteomics.

Liao L, Pilotte J, Xu T, Wong CC, Edelman GM, Vanderklish P, Yates JR 3rd. Liao L, et al. J Proteome Res. 2007 Mar;6(3):1059-71. doi: 10.1021/pr060358f. J Proteome Res. 2007. PMID: 17330943

3

Global analysis of posttranslational protein arginylation.

Wong CC, Xu T, Rai R, Bailey AO, Yates JR 3rd, Wolf YI, Zebroski H, Kashina A. Wong CC, et al. PLoS Biol. 2007 Oct;5(10):e258. doi: 10.1371/journal.pbio.0050258. PLoS Biol. 2007. PMID: 17896865 Free PMC article.

4

Nbl1p: a Borealin/Dasra/CSC-1-like protein essential for Aurora/Ipl1 complex function and integrity in Saccharomyces cerevisiae.

Nakajima Y, Tyers RG, Wong CC, Yates JR 3rd, Drubin DG, Barnes G. Nakajima Y, et al. Mol Biol Cell. 2009 Mar;20(6):1772-84. doi: 10.1091/mbc.e08-10-1011. Epub 2009 Jan 21. Mol Biol Cell. 2009. PMID: 19158380 Free PMC article.

5

Charge prediction machine: tool for inferring precursor charge states of electron transfer dissociation tandem mass spectra.

Carvalho PC, Cociorva D, Wong CC, Carvalho Mda G, Barbosa VC, Yates JR 3rd. Carvalho PC, et al. Anal Chem. 2009 Mar 1;81(5):1996-2003. doi: 10.1021/ac8025288. Anal Chem. 2009. PMID: 19203245 Free PMC article.

6

Identification of N-terminally arginylated proteins and peptides by mass spectrometry.

Xu T, Wong CC, Kashina A, Yates JR 3rd. Xu T, et al. Nat Protoc. 2009;4(3):325-32. doi: 10.1038/nprot.2008.248. Nat Protoc. 2009. PMID: 19229197 Free PMC article.

7

A HUPO test sample study reveals common problems in mass spectrometry-based proteomics.

Bell AW, Deutsch EW, Au CE, Kearney RE, Beavis R, Sechi S, Nilsson T, Bergeron JJ; HUPO Test Sample Working Group. Bell AW, et al. Nat Methods. 2009 Jun;6(6):423-30. doi: 10.1038/nmeth.1333. Nat Methods. 2009. PMID: 19448641 Free PMC article.

8

Comparison of different signal thresholds on data dependent sampling in Orbitrap and LTQ mass spectrometry for the identification of peptides and proteins in complex mixtures.

Wong CC, Cociorva D, Venable JD, Xu T, Yates JR 3rd. Wong CC, et al. J Am Soc Mass Spectrom. 2009 Aug;20(8):1405-14. doi: 10.1016/j.jasms.2009.04.007. Epub 2009 Apr 18. J Am Soc Mass Spectrom. 2009. PMID: 19467883 Free PMC article.

9

Transnitrosylation of XIAP regulates caspase-dependent neuronal cell death.

Nakamura T, Wang L, Wong CC, Scott FL, Eckelman BP, Han X, Tzitzilonis C, Meng F, Gu Z, Holland EA, Clemente AT, Okamoto S, Salvesen GS, Riek R, Yates JR 3rd, Lipton SA. Nakamura T, et al. Mol Cell. 2010 Jul 30;39(2):184-95. doi: 10.1016/j.molcel.2010.07.002. Mol Cell. 2010. PMID: 20670888 Free PMC article.

10

Arginylation and methylation double up to regulate nuclear proteins and nuclear architecture in vivo.

Saha S, Wong CC, Xu T, Namgoong S, Zebroski H, Yates JR 3rd, Kashina A. Saha S, et al. Chem Biol. 2011 Nov 23;18(11):1369-78. doi: 10.1016/j.chembiol.2011.08.019. Chem Biol. 2011. PMID: 22118671 Free PMC article.

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