Smidt H - Search Results

1

Draft genome sequence and characterization of Desulfitobacterium hafniense PCE-S.

Goris T, Hornung B, Kruse T, Reinhold A, Westermann M, Schaap PJ, Smidt H, Diekert G. Goris T, et al. Among authors: smidt h. Stand Genomic Sci. 2015 Feb 24;10:15. doi: 10.1186/1944-3277-10-15. eCollection 2015. Stand Genomic Sci. 2015. PMID: 26203328 Free PMC article.

2

The restricted metabolism of the obligate organohalide respiring bacterium Dehalobacter restrictus: lessons from tiered functional genomics.

Rupakula A, Kruse T, Boeren S, Holliger C, Smidt H, Maillard J. Rupakula A, et al. Among authors: smidt h. Philos Trans R Soc Lond B Biol Sci. 2013 Mar 11;368(1616):20120325. doi: 10.1098/rstb.2012.0325. Print 2013 Apr 19. Philos Trans R Soc Lond B Biol Sci. 2013. PMID: 23479754 Free PMC article.

3

Genome analysis and physiological comparison of Alicycliphilus denitrificans strains BC and K601(T.).

Oosterkamp MJ, Veuskens T, Talarico Saia F, Weelink SA, Goodwin LA, Daligault HE, Bruce DC, Detter JC, Tapia R, Han CS, Land ML, Hauser LJ, Langenhoff AA, Gerritse J, van Berkel WJ, Pieper DH, Junca H, Smidt H, Schraa G, Davids M, Schaap PJ, Plugge CM, Stams AJ. Oosterkamp MJ, et al. Among authors: smidt h. PLoS One. 2013 Jun 25;8(6):e66971. doi: 10.1371/journal.pone.0066971. Print 2013. PLoS One. 2013. PMID: 23825601 Free PMC article.

4

A comprehensive metatranscriptome analysis pipeline and its validation using human small intestine microbiota datasets.

Leimena MM, Ramiro-Garcia J, Davids M, van den Bogert B, Smidt H, Smid EJ, Boekhorst J, Zoetendal EG, Schaap PJ, Kleerebezem M. Leimena MM, et al. Among authors: smidt h. BMC Genomics. 2013 Aug 2;14:530. doi: 10.1186/1471-2164-14-530. BMC Genomics. 2013. PMID: 23915218 Free PMC article.

5

Complete genome sequence of Dehalobacter restrictus PER-K23(T.).

Kruse T, Maillard J, Goodwin L, Woyke T, Teshima H, Bruce D, Detter C, Tapia R, Han C, Huntemann M, Wei CL, Han J, Chen A, Kyrpides N, Szeto E, Markowitz V, Ivanova N, Pagani I, Pati A, Pitluck S, Nolan M, Holliger C, Smidt H. Kruse T, et al. Among authors: smidt h. Stand Genomic Sci. 2013 Jul 30;8(3):375-88. doi: 10.4056/sigs.3787426. eCollection 2013 Jul 30. Stand Genomic Sci. 2013. PMID: 24501624 Free PMC article.

6

vanI: a novel D-Ala-D-Lac vancomycin resistance gene cluster found in Desulfitobacterium hafniense.

Kruse T, Levisson M, de Vos WM, Smidt H. Kruse T, et al. Among authors: smidt h. Microb Biotechnol. 2014 Sep;7(5):456-66. doi: 10.1111/1751-7915.12139. Epub 2014 Jul 5. Microb Biotechnol. 2014. PMID: 25042042 Free PMC article.

7

Genomic, proteomic, and biochemical analysis of the organohalide respiratory pathway in Desulfitobacterium dehalogenans.

Kruse T, van de Pas BA, Atteia A, Krab K, Hagen WR, Goodwin L, Chain P, Boeren S, Maphosa F, Schraa G, de Vos WM, van der Oost J, Smidt H, Stams AJ. Kruse T, et al. Among authors: smidt h. J Bacteriol. 2015 Mar;197(5):893-904. doi: 10.1128/JB.02370-14. Epub 2014 Dec 15. J Bacteriol. 2015. PMID: 25512312 Free PMC article.

8

Functional genomics of corrinoid starvation in the organohalide-respiring bacterium Dehalobacter restrictus strain PER-K23.

Rupakula A, Lu Y, Kruse T, Boeren S, Holliger C, Smidt H, Maillard J. Rupakula A, et al. Among authors: smidt h. Front Microbiol. 2015 Jan 6;5:751. doi: 10.3389/fmicb.2014.00751. eCollection 2014. Front Microbiol. 2015. PMID: 25610435 Free PMC article.

9

Impact of a wastewater treatment plant on microbial community composition and function in a hyporheic zone of a eutrophic river.

Atashgahi S, Aydin R, Dimitrov MR, Sipkema D, Hamonts K, Lahti L, Maphosa F, Kruse T, Saccenti E, Springael D, Dejonghe W, Smidt H. Atashgahi S, et al. Among authors: smidt h. Sci Rep. 2015 Nov 26;5:17284. doi: 10.1038/srep17284. Sci Rep. 2015. PMID: 26607034 Free PMC article.

10

Functional Profiling of Unfamiliar Microbial Communities Using a Validated De Novo Assembly Metatranscriptome Pipeline.

Davids M, Hugenholtz F, Martins dos Santos V, Smidt H, Kleerebezem M, Schaap PJ. Davids M, et al. Among authors: smidt h. PLoS One. 2016 Jan 12;11(1):e0146423. doi: 10.1371/journal.pone.0146423. eCollection 2016. PLoS One. 2016. PMID: 26756338 Free PMC article.

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