Jacob L - Search Results

1

A convex formulation for joint RNA isoform detection and quantification from multiple RNA-seq samples.

Bernard E, Jacob L, Mairal J, Viara E, Vert JP. Bernard E, et al. Among authors: jacob l. BMC Bioinformatics. 2015 Aug 19;16:262. doi: 10.1186/s12859-015-0695-9. BMC Bioinformatics. 2015. PMID: 26286719 Free PMC article.

2

Virtual screening of GPCRs: an in silico chemogenomics approach.

Jacob L, Hoffmann B, Stoven V, Vert JP. Jacob L, et al. BMC Bioinformatics. 2008 Sep 6;9:363. doi: 10.1186/1471-2105-9-363. BMC Bioinformatics. 2008. PMID: 18775075 Free PMC article.

3

Efficient RNA isoform identification and quantification from RNA-Seq data with network flows.

Bernard E, Jacob L, Mairal J, Vert JP. Bernard E, et al. Among authors: jacob l. Bioinformatics. 2014 Sep 1;30(17):2447-55. doi: 10.1093/bioinformatics/btu317. Epub 2014 May 9. Bioinformatics. 2014. PMID: 24813214 Free PMC article.

4

Biological sequence modeling with convolutional kernel networks.

Chen D, Jacob L, Mairal J. Chen D, et al. Among authors: jacob l. Bioinformatics. 2019 Sep 15;35(18):3294-3302. doi: 10.1093/bioinformatics/btz094. Bioinformatics. 2019. PMID: 30753280

5

Efficient peptide-MHC-I binding prediction for alleles with few known binders.

Jacob L, Vert JP. Jacob L, et al. Bioinformatics. 2008 Feb 1;24(3):358-66. doi: 10.1093/bioinformatics/btm611. Epub 2007 Dec 14. Bioinformatics. 2008. PMID: 18083718

6

Protein-ligand interaction prediction: an improved chemogenomics approach.

Jacob L, Vert JP. Jacob L, et al. Bioinformatics. 2008 Oct 1;24(19):2149-56. doi: 10.1093/bioinformatics/btn409. Epub 2008 Aug 1. Bioinformatics. 2008. PMID: 18676415 Free PMC article.

7

Machine learning for in silico virtual screening and chemical genomics: new strategies.

Vert JP, Jacob L. Vert JP, et al. Among authors: jacob l. Comb Chem High Throughput Screen. 2008 Sep;11(8):677-85. doi: 10.2174/138620708785739899. Comb Chem High Throughput Screen. 2008. PMID: 18795887 Free PMC article. Review.

8

Combining calls from multiple somatic mutation-callers.

Kim SY, Jacob L, Speed TP. Kim SY, et al. Among authors: jacob l. BMC Bioinformatics. 2014 May 21;15:154. doi: 10.1186/1471-2105-15-154. BMC Bioinformatics. 2014. PMID: 24885750 Free PMC article.

9

CALDERA: finding all significant de Bruijn subgraphs for bacterial GWAS.

Roux de Bézieux H, Lima L, Perraudeau F, Mary A, Dudoit S, Jacob L. Roux de Bézieux H, et al. Among authors: jacob l. Bioinformatics. 2022 Jun 24;38(Suppl 1):i36-i44. doi: 10.1093/bioinformatics/btac238. Bioinformatics. 2022. PMID: 35758804 Free PMC article.

10

A fast and agnostic method for bacterial genome-wide association studies: Bridging the gap between k-mers and genetic events.

Jaillard M, Lima L, Tournoud M, Mahé P, van Belkum A, Lacroix V, Jacob L. Jaillard M, et al. Among authors: jacob l. PLoS Genet. 2018 Nov 12;14(11):e1007758. doi: 10.1371/journal.pgen.1007758. eCollection 2018 Nov. PLoS Genet. 2018. PMID: 30419019 Free PMC article.

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