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245 results

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Functional assessment of time course microarray data.
Nueda MJ, Sebastián P, Tarazona S, García-García F, Dopazo J, Ferrer A, Conesa A. Nueda MJ, et al. Among authors: conesa a. BMC Bioinformatics. 2009 Jun 16;10 Suppl 6(Suppl 6):S9. doi: 10.1186/1471-2105-10-S6-S9. BMC Bioinformatics. 2009. PMID: 19534758 Free PMC article.
Hypoxia promotes efficient differentiation of human embryonic stem cells to functional endothelium.
Prado-Lopez S, Conesa A, Armiñán A, Martínez-Losa M, Escobedo-Lucea C, Gandia C, Tarazona S, Melguizo D, Blesa D, Montaner D, Sanz-González S, Sepúlveda P, Götz S, O'Connor JE, Moreno R, Dopazo J, Burks DJ, Stojkovic M. Prado-Lopez S, et al. Among authors: conesa a. Stem Cells. 2010 Mar 31;28(3):407-18. doi: 10.1002/stem.295. Stem Cells. 2010. PMID: 20049902
Differential expression in RNA-seq: a matter of depth.
Tarazona S, García-Alcalde F, Dopazo J, Ferrer A, Conesa A. Tarazona S, et al. Among authors: conesa a. Genome Res. 2011 Dec;21(12):2213-23. doi: 10.1101/gr.124321.111. Epub 2011 Sep 8. Genome Res. 2011. PMID: 21903743 Free PMC article.
Qualimap: evaluating next-generation sequencing alignment data.
García-Alcalde F, Okonechnikov K, Carbonell J, Cruz LM, Götz S, Tarazona S, Dopazo J, Meyer TF, Conesa A. García-Alcalde F, et al. Among authors: conesa a. Bioinformatics. 2012 Oct 15;28(20):2678-9. doi: 10.1093/bioinformatics/bts503. Epub 2012 Aug 22. Bioinformatics. 2012. PMID: 22914218
Pathway network inference from gene expression data.
Ponzoni I, Nueda M, Tarazona S, Götz S, Montaner D, Dussaut J, Dopazo J, Conesa A. Ponzoni I, et al. Among authors: conesa a. BMC Syst Biol. 2014;8 Suppl 2(Suppl 2):S7. doi: 10.1186/1752-0509-8-S2-S7. Epub 2014 Mar 13. BMC Syst Biol. 2014. PMID: 25032889 Free PMC article.
Understanding disease mechanisms with models of signaling pathway activities.
Sebastian-Leon P, Vidal E, Minguez P, Conesa A, Tarazona S, Amadoz A, Armero C, Salavert F, Vidal-Puig A, Montaner D, Dopazo J. Sebastian-Leon P, et al. Among authors: conesa a. BMC Syst Biol. 2014 Oct 25;8:121. doi: 10.1186/s12918-014-0121-3. BMC Syst Biol. 2014. PMID: 25344409 Free PMC article.
245 results