Xia B - Search Results

1

Bisulfite-free, base-resolution analysis of 5-formylcytosine at the genome scale.

Xia B, Han D, Lu X, Sun Z, Zhou A, Yin Q, Zeng H, Liu M, Jiang X, Xie W, He C, Yi C. Xia B, et al. Nat Methods. 2015 Nov;12(11):1047-50. doi: 10.1038/nmeth.3569. Epub 2015 Sep 7. Nat Methods. 2015. PMID: 26344045 Free PMC article.

2

Oxidative demethylation of DNA and RNA mediated by non-heme iron-dependent dioxygenases.

Lu L, Zhu C, Xia B, Yi C. Lu L, et al. Among authors: xia b. Chem Asian J. 2014 Aug;9(8):2018-29. doi: 10.1002/asia.201402148. Epub 2014 Jun 6. Chem Asian J. 2014. PMID: 24909658 Review.

3

Single-base resolution analysis of DNA epigenome via high-throughput sequencing.

Peng J, Xia B, Yi C. Peng J, et al. Among authors: xia b. Sci China Life Sci. 2016 Mar;59(3):219-26. doi: 10.1007/s11427-016-5013-x. Epub 2016 Jan 29. Sci China Life Sci. 2016. PMID: 26825949 Review.

4

Single-Cell 5-Formylcytosine Landscapes of Mammalian Early Embryos and ESCs at Single-Base Resolution.

Zhu C, Gao Y, Guo H, Xia B, Song J, Wu X, Zeng H, Kee K, Tang F, Yi C. Zhu C, et al. Among authors: xia b. Cell Stem Cell. 2017 May 4;20(5):720-731.e5. doi: 10.1016/j.stem.2017.02.013. Epub 2017 Mar 23. Cell Stem Cell. 2017. PMID: 28343982 Free article.

5

Bisulfite-Free, Nanoscale Analysis of 5-Hydroxymethylcytosine at Single Base Resolution.

Zeng H, He B, Xia B, Bai D, Lu X, Cai J, Chen L, Zhou A, Zhu C, Meng H, Gao Y, Guo H, He C, Dai Q, Yi C. Zeng H, et al. Among authors: xia b. J Am Chem Soc. 2018 Oct 17;140(41):13190-13194. doi: 10.1021/jacs.8b08297. Epub 2018 Oct 4. J Am Chem Soc. 2018. PMID: 30278133 Free PMC article.

6

Unnatural Cytosine Bases Recognized as Thymines by DNA Polymerases by the Formation of the Watson-Crick Geometry.

Zeng H, Mondal M, Song R, Zhang J, Xia B, Liu M, Zhu C, He B, Gao YQ, Yi C. Zeng H, et al. Among authors: xia b. Angew Chem Int Ed Engl. 2019 Jan 2;58(1):130-133. doi: 10.1002/anie.201807845. Epub 2018 Dec 5. Angew Chem Int Ed Engl. 2019. PMID: 30407705

7

On the genetic basis of tail-loss evolution in humans and apes.

Xia B, Zhang W, Zhao G, Zhang X, Bai J, Brosh R, Wudzinska A, Huang E, Ashe H, Ellis G, Pour M, Zhao Y, Coelho C, Zhu Y, Miller A, Dasen JS, Maurano MT, Kim SY, Boeke JD, Yanai I. Xia B, et al. Nature. 2024 Feb;626(8001):1042-1048. doi: 10.1038/s41586-024-07095-8. Epub 2024 Feb 28. Nature. 2024. PMID: 38418917 Free PMC article.

8

Integrative multi-omics profiling in human decedents receiving pig heart xenografts.

Schmauch E, Piening B, Mohebnasab M, Xia B, Zhu C, Stern J, Zhang W, Dowdell AK, Kim JI, Andrijevic D, Khalil K, Jaffe IS, Loza BL, Gragert L, Camellato BR, Oliveira MF, O'Brien DP, Chen HM, Weldon E, Gao H, Gandla D, Chang A, Bhatt R, Gao S, Lin X, Reddy KP, Kagermazova L, Habara AH, Widawsky S, Liang FX, Sall J, Loupy A, Heguy A, Taylor SEB, Zhu Y, Michael B, Jiang L, Jian R, Chong AS, Fairchild RL, Linna-Kuosmanen S, Kaikkonen MU, Tatapudi V, Lorber M, Ayares D, Mangiola M, Narula N, Moazami N, Pass H, Herati RS, Griesemer A, Kellis M, Snyder MP, Montgomery RA, Boeke JD, Keating BJ. Schmauch E, et al. Among authors: xia b. Nat Med. 2024 May;30(5):1448-1460. doi: 10.1038/s41591-024-02972-1. Epub 2024 May 17. Nat Med. 2024. PMID: 38760586

9

Cell-type-specific prediction of 3D chromatin organization enables high-throughput in silico genetic screening.

Tan J, Shenker-Tauris N, Rodriguez-Hernaez J, Wang E, Sakellaropoulos T, Boccalatte F, Thandapani P, Skok J, Aifantis I, Fenyö D, Xia B, Tsirigos A. Tan J, et al. Among authors: xia b. Nat Biotechnol. 2023 Aug;41(8):1140-1150. doi: 10.1038/s41587-022-01612-8. Epub 2023 Jan 9. Nat Biotechnol. 2023. PMID: 36624151 Free PMC article.

10

Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment.

Barkley D, Moncada R, Pour M, Liberman DA, Dryg I, Werba G, Wang W, Baron M, Rao A, Xia B, França GS, Weil A, Delair DF, Hajdu C, Lund AW, Osman I, Yanai I. Barkley D, et al. Among authors: xia b. Nat Genet. 2022 Aug;54(8):1192-1201. doi: 10.1038/s41588-022-01141-9. Epub 2022 Aug 5. Nat Genet. 2022. PMID: 35931863 Free PMC article.

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