Jensen S - Search Results

1

Bayesian integration of genetics and epigenetics detects causal regulatory SNPs underlying expression variability.

Das A, Morley M, Moravec CS, Tang WH, Hakonarson H; MAGNet Consortium; Margulies KB, Cappola TP, Jensen S, Hannenhalli S. Das A, et al. Among authors: jensen s. Nat Commun. 2015 Oct 12;6:8555. doi: 10.1038/ncomms9555. Nat Commun. 2015. PMID: 26456756 Free PMC article.

2

PECONPI: a novel software for uncovering pathogenic copy number variations in non-syndromic sensorineural hearing loss and other genetically heterogeneous disorders.

Tsai EA, Berman MA, Conlin LK, Rehm HL, Francey LJ, Deardorff MA, Holst J, Kaur M, Gallant E, Clark DM, Glessner JT, Jensen ST, Grant SF, Gruber PJ, Hakonarson H, Spinner NB, Krantz ID. Tsai EA, et al. Am J Med Genet A. 2013 Sep;161A(9):2134-47. doi: 10.1002/ajmg.a.36038. Epub 2013 Jul 29. Am J Med Genet A. 2013. PMID: 23897863 Free PMC article.

3

A Bayesian approach to efficient differential allocation for resampling-based significance testing.

Jensen ST, Soi S, Wang LS. Jensen ST, et al. BMC Bioinformatics. 2009 Jun 28;10:198. doi: 10.1186/1471-2105-10-198. BMC Bioinformatics. 2009. PMID: 19558706 Free PMC article.

4

LEAFY target genes reveal floral regulatory logic, cis motifs, and a link to biotic stimulus response.

Winter CM, Austin RS, Blanvillain-Baufumé S, Reback MA, Monniaux M, Wu MF, Sang Y, Yamaguchi A, Yamaguchi N, Parker JE, Parcy F, Jensen ST, Li H, Wagner D. Winter CM, et al. Among authors: jensen st. Dev Cell. 2011 Apr 19;20(4):430-43. doi: 10.1016/j.devcel.2011.03.019. Dev Cell. 2011. PMID: 21497757 Free article.

5

Mouse Label-Retaining Cells Are Molecularly and Functionally Distinct From Reserve Intestinal Stem Cells.

Li N, Nakauka-Ddamba A, Tobias J, Jensen ST, Lengner CJ. Li N, et al. Gastroenterology. 2016 Aug;151(2):298-310.e7. doi: 10.1053/j.gastro.2016.04.049. Epub 2016 May 27. Gastroenterology. 2016. PMID: 27237597 Free PMC article.

6

Regularized sequence-context mutational trees capture variation in mutation rates across the human genome.

Adams CJ, Conery M, Auerbach BJ, Jensen ST, Mathieson I, Voight BF. Adams CJ, et al. PLoS Genet. 2023 Jul 7;19(7):e1010807. doi: 10.1371/journal.pgen.1010807. eCollection 2023 Jul. PLoS Genet. 2023. PMID: 37418489 Free PMC article.

7

Switching between raltegravir resistance pathways analyzed by deep sequencing.

Mukherjee R, Jensen ST, Male F, Bittinger K, Hodinka RL, Miller MD, Bushman FD. Mukherjee R, et al. AIDS. 2011 Oct 23;25(16):1951-9. doi: 10.1097/QAD.0b013e32834b34de. AIDS. 2011. PMID: 21832937 Free PMC article.

8

Heterogeneity in readouts of canonical wnt pathway activity within intestinal crypts.

Li N, Yousefi M, Nakauka-Ddamba A, Tobias JW, Jensen ST, Morrisey EE, Lengner CJ. Li N, et al. Dev Dyn. 2016 Aug;245(8):822-33. doi: 10.1002/dvdy.24423. Epub 2016 Jul 5. Dev Dyn. 2016. PMID: 27264700 Free PMC article.

9

Quantitative phosphoproteomics reveals extensive cellular reprogramming during HIV-1 entry.

Wojcechowskyj JA, Didigu CA, Lee JY, Parrish NF, Sinha R, Hahn BH, Bushman FD, Jensen ST, Seeholzer SH, Doms RW. Wojcechowskyj JA, et al. Cell Host Microbe. 2013 May 15;13(5):613-623. doi: 10.1016/j.chom.2013.04.011. Cell Host Microbe. 2013. PMID: 23684312 Free PMC article.

10

Single-cell analysis of proxy reporter allele-marked epithelial cells establishes intestinal stem cell hierarchy.

Li N, Yousefi M, Nakauka-Ddamba A, Jain R, Tobias J, Epstein JA, Jensen ST, Lengner CJ. Li N, et al. Stem Cell Reports. 2014 Nov 11;3(5):876-91. doi: 10.1016/j.stemcr.2014.09.011. Epub 2014 Oct 23. Stem Cell Reports. 2014. PMID: 25418730 Free PMC article.

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